BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0720.1
(300 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05940.4 | cationic amino acid transporter 9 | Chr1:1801997-1... 359 e-122
AT1G05940.3 | cationic amino acid transporter 9 | Chr1:1801561-1... 358 e-121
AT1G05940.1 | cationic amino acid transporter 9 | Chr1:1801365-1... 358 e-121
AT1G05940.2 | cationic amino acid transporter 9 | Chr1:1801365-1... 217 2e-67
AT3G03720.1 | cationic amino acid transporter 4 | Chr3:925870-92... 152 1e-41
>AT1G05940.4 | cationic amino acid transporter 9 |
Chr1:1801997-1803942 REVERSE LENGTH=500 | 201606
Length = 500
Score = 359 bits (922), Expect = e-122, Method: Compositional matrix adjust.
Identities = 197/272 (72%), Positives = 230/272 (84%), Gaps = 5/272 (1%)
Query: 15 SSSSFFSNLCSSALRVKSIDSFPSSDNTRLLTSSSSSDGLVRHLGLFQLILLGIGASIGA 74
SS+++FS+ +SALR KS+ P S T + S+S D LVR LGLF LILLG+GASIGA
Sbjct: 13 SSATWFSHFRASALRSKSLP--PPSSQTAV--RSTSGDSLVRRLGLFDLILLGVGASIGA 68
Query: 75 GIFVVTGAVARSAGPGVTISFILAGAACVLNALCYAELSSRFPAVVGGAYLYCYSAFNEL 134
G+FVVTG VAR AGPGVTISF+LAGA+CVLNALCYAELSSRFPAVVGGAY+Y YSAFNE+
Sbjct: 69 GVFVVTGTVARDAGPGVTISFLLAGASCVLNALCYAELSSRFPAVVGGAYMYSYSAFNEI 128
Query: 135 TAFLVFTQLMLDYHIGAASIARSLASYVVTLLELVPVFRDHIPNWVGHGGKQFLGGTLSI 194
TAFLVF QLMLDYHIGAASI+RSLASY V LLEL P + IP W+G GK+ LGG LS+
Sbjct: 129 TAFLVFVQLMLDYHIGAASISRSLASYAVALLELFPALKGSIPLWMGS-GKELLGGLLSL 187
Query: 195 NLLAPFLLLLLTIILCRGVGESSFFNSLMTATKVVIVLVVIIAGSFKVDVDNWHPFAPHG 254
N+LAP LL LLT++LC+GV ESS NS+MTATKVVIVLVVI AG+F++DV NW PFAP+G
Sbjct: 188 NILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFEIDVANWSPFAPNG 247
Query: 255 YKAIITGSTVVFFAYVGFDAVANSAEESKRPQ 286
+KA++TG+TVVFF+YVGFDAVANSAEESK PQ
Sbjct: 248 FKAVLTGATVVFFSYVGFDAVANSAEESKNPQ 279
>AT1G05940.3 | cationic amino acid transporter 9 |
Chr1:1801561-1803942 REVERSE LENGTH=529 | 201606
Length = 529
Score = 358 bits (919), Expect = e-121, Method: Compositional matrix adjust.
Identities = 197/272 (72%), Positives = 230/272 (84%), Gaps = 5/272 (1%)
Query: 15 SSSSFFSNLCSSALRVKSIDSFPSSDNTRLLTSSSSSDGLVRHLGLFQLILLGIGASIGA 74
SS+++FS+ +SALR KS+ P S T + S+S D LVR LGLF LILLG+GASIGA
Sbjct: 13 SSATWFSHFRASALRSKSLP--PPSSQTAV--RSTSGDSLVRRLGLFDLILLGVGASIGA 68
Query: 75 GIFVVTGAVARSAGPGVTISFILAGAACVLNALCYAELSSRFPAVVGGAYLYCYSAFNEL 134
G+FVVTG VAR AGPGVTISF+LAGA+CVLNALCYAELSSRFPAVVGGAY+Y YSAFNE+
Sbjct: 69 GVFVVTGTVARDAGPGVTISFLLAGASCVLNALCYAELSSRFPAVVGGAYMYSYSAFNEI 128
Query: 135 TAFLVFTQLMLDYHIGAASIARSLASYVVTLLELVPVFRDHIPNWVGHGGKQFLGGTLSI 194
TAFLVF QLMLDYHIGAASI+RSLASY V LLEL P + IP W+G GK+ LGG LS+
Sbjct: 129 TAFLVFVQLMLDYHIGAASISRSLASYAVALLELFPALKGSIPLWMGS-GKELLGGLLSL 187
Query: 195 NLLAPFLLLLLTIILCRGVGESSFFNSLMTATKVVIVLVVIIAGSFKVDVDNWHPFAPHG 254
N+LAP LL LLT++LC+GV ESS NS+MTATKVVIVLVVI AG+F++DV NW PFAP+G
Sbjct: 188 NILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFEIDVANWSPFAPNG 247
Query: 255 YKAIITGSTVVFFAYVGFDAVANSAEESKRPQ 286
+KA++TG+TVVFF+YVGFDAVANSAEESK PQ
Sbjct: 248 FKAVLTGATVVFFSYVGFDAVANSAEESKNPQ 279
>AT1G05940.1 | cationic amino acid transporter 9 |
Chr1:1801365-1803942 REVERSE LENGTH=569 | 201606
Length = 569
Score = 358 bits (919), Expect = e-121, Method: Compositional matrix adjust.
Identities = 197/272 (72%), Positives = 230/272 (84%), Gaps = 5/272 (1%)
Query: 15 SSSSFFSNLCSSALRVKSIDSFPSSDNTRLLTSSSSSDGLVRHLGLFQLILLGIGASIGA 74
SS+++FS+ +SALR KS+ P S T + S+S D LVR LGLF LILLG+GASIGA
Sbjct: 13 SSATWFSHFRASALRSKSLP--PPSSQTAV--RSTSGDSLVRRLGLFDLILLGVGASIGA 68
Query: 75 GIFVVTGAVARSAGPGVTISFILAGAACVLNALCYAELSSRFPAVVGGAYLYCYSAFNEL 134
G+FVVTG VAR AGPGVTISF+LAGA+CVLNALCYAELSSRFPAVVGGAY+Y YSAFNE+
Sbjct: 69 GVFVVTGTVARDAGPGVTISFLLAGASCVLNALCYAELSSRFPAVVGGAYMYSYSAFNEI 128
Query: 135 TAFLVFTQLMLDYHIGAASIARSLASYVVTLLELVPVFRDHIPNWVGHGGKQFLGGTLSI 194
TAFLVF QLMLDYHIGAASI+RSLASY V LLEL P + IP W+G GK+ LGG LS+
Sbjct: 129 TAFLVFVQLMLDYHIGAASISRSLASYAVALLELFPALKGSIPLWMGS-GKELLGGLLSL 187
Query: 195 NLLAPFLLLLLTIILCRGVGESSFFNSLMTATKVVIVLVVIIAGSFKVDVDNWHPFAPHG 254
N+LAP LL LLT++LC+GV ESS NS+MTATKVVIVLVVI AG+F++DV NW PFAP+G
Sbjct: 188 NILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFEIDVANWSPFAPNG 247
Query: 255 YKAIITGSTVVFFAYVGFDAVANSAEESKRPQ 286
+KA++TG+TVVFF+YVGFDAVANSAEESK PQ
Sbjct: 248 FKAVLTGATVVFFSYVGFDAVANSAEESKNPQ 279
>AT1G05940.2 | cationic amino acid transporter 9 |
Chr1:1801365-1803503 REVERSE LENGTH=451 | 201606
Length = 451
Score = 217 bits (553), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/162 (72%), Positives = 139/162 (85%), Gaps = 1/162 (0%)
Query: 125 LYCYSAFNELTAFLVFTQLMLDYHIGAASIARSLASYVVTLLELVPVFRDHIPNWVGHGG 184
+Y YSAFNE+TAFLVF QLMLDYHIGAASI+RSLASY V LLEL P + IP W+G G
Sbjct: 1 MYSYSAFNEITAFLVFVQLMLDYHIGAASISRSLASYAVALLELFPALKGSIPLWMG-SG 59
Query: 185 KQFLGGTLSINLLAPFLLLLLTIILCRGVGESSFFNSLMTATKVVIVLVVIIAGSFKVDV 244
K+ LGG LS+N+LAP LL LLT++LC+GV ESS NS+MTATKVVIVLVVI AG+F++DV
Sbjct: 60 KELLGGLLSLNILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFEIDV 119
Query: 245 DNWHPFAPHGYKAIITGSTVVFFAYVGFDAVANSAEESKRPQ 286
NW PFAP+G+KA++TG+TVVFF+YVGFDAVANSAEESK PQ
Sbjct: 120 ANWSPFAPNGFKAVLTGATVVFFSYVGFDAVANSAEESKNPQ 161
>AT3G03720.1 | cationic amino acid transporter 4 |
Chr3:925870-929700 REVERSE LENGTH=600 | 201606
Length = 600
Score = 152 bits (384), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 149/274 (54%), Gaps = 31/274 (11%)
Query: 25 SSALRVKSIDSFPSSDNTRLLTSSSSSDGLVRHLGLFQLILLGIGASIGAGIFVVTGAVA 84
+S +R K +DS L + L + L L+ +G+G +IGAG++++ G VA
Sbjct: 2 NSLVRRKQVDSVH-------LIKNDGPHQLAKKLSAVDLVAIGVGTTIGAGVYILVGTVA 54
Query: 85 RS-AGPGVTISFILAGAACVLNALCYAELSSRFPAVVGGAYLYCYSAFNELTAFLVFTQL 143
R GP + +SF +AG A L+A CYAEL+SR P+ G AY Y Y E A+LV L
Sbjct: 55 REHTGPALAVSFFIAGVAAALSACCYAELASRCPSA-GSAYHYAYICLGEGIAWLVGWAL 113
Query: 144 MLDYHIGAASIARSLASYVVTL---LELVPVF--RDHIPNWVGHGGKQFLGGTLSINLLA 198
+LDY IG ++IAR + + + L+ +PVF R IP G + ++ A
Sbjct: 114 VLDYTIGGSAIARGITPNLASFFGGLDNLPVFLARQTIP-----------GVGIVVDPCA 162
Query: 199 PFLLLLLTIILCRGVGESSFFNSLMTATKVVIVLVVIIAGSFKVDVDNW------HPFAP 252
L++++TI+LC G+ ESS +++T+ V ++ +I+ G + W + P
Sbjct: 163 ALLIMIVTILLCFGIKESSTVQAIVTSVNVCTLVFIIVVGGYLACKTGWVGYDLPSGYFP 222
Query: 253 HGYKAIITGSTVVFFAYVGFDAVANSAEESKRPQ 286
G I+ GS VVFF+Y+GFD V ++AEE K PQ
Sbjct: 223 FGLNGILAGSAVVFFSYIGFDTVTSTAEEVKNPQ 256