BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0790.1
(323 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G20760.1 | NAD(P)-binding Rossmann-fold superfamily protein |... 117 3e-30
AT4G20760.2 | NAD(P)-binding Rossmann-fold superfamily protein |... 116 6e-30
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 66 8e-12
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 64 2e-11
AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 62 4e-11
>AT4G20760.1 | NAD(P)-binding Rossmann-fold superfamily protein |
Chr4:11129043-11130541 FORWARD LENGTH=298 | 201606
Length = 298
Score = 117 bits (292), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 232 VRQLLEYNDRGHVVATCRNPEEATNLLELKKTFPERLNILQLDVTVDSTIEASAHSIQEK 291
VRQLLE N G+VVATCRNP+EAT+L +LK F ERL I +LDVT ++TIE SA S++EK
Sbjct: 60 VRQLLENNKNGYVVATCRNPKEATSLSDLKNRFSERLFIQKLDVTDETTIEESAESVREK 119
Query: 292 YGALNLLINTTGILSIPNLLQPGTNFTRILK 322
YG+LNLLIN GILSIP +LQP T ++ K
Sbjct: 120 YGSLNLLINAAGILSIPGVLQPETTLNKVEK 150
>AT4G20760.2 | NAD(P)-binding Rossmann-fold superfamily protein |
Chr4:11128983-11130541 FORWARD LENGTH=318 | 201606
Length = 318
Score = 116 bits (291), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 232 VRQLLEYNDRGHVVATCRNPEEATNLLELKKTFPERLNILQLDVTVDSTIEASAHSIQEK 291
VRQLLE N G+VVATCRNP+EAT+L +LK F ERL I +LDVT ++TIE SA S++EK
Sbjct: 80 VRQLLENNKNGYVVATCRNPKEATSLSDLKNRFSERLFIQKLDVTDETTIEESAESVREK 139
Query: 292 YGALNLLINTTGILSIPNLLQPGTNFTRILK 322
YG+LNLLIN GILSIP +LQP T ++ K
Sbjct: 140 YGSLNLLINAAGILSIPGVLQPETTLNKVEK 170
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 33/250 (13%)
Query: 1 MLHCTFARAIWLHFNIR---TSNFSSVLEWILYW-------KTLEETRITMMSKIMWFIW 50
+ CTFAR W +I ++ + LYW E ++ ++W +W
Sbjct: 309 LFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLW 368
Query: 51 KARCEKSFGNKDYTPQHVLHM----IQSFVTNTQE----AKPPSMKSEQPKWSPPTPPFL 102
K R E F +++ Q VL ++ + T+ KP +S +W PP ++
Sbjct: 369 KNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWV 428
Query: 103 KINVDASFTSYMEPAGIGSIIHDEKGEFIIALADTI-RGQTAEECEGIAILKAIHWATDL 161
K N DA++ E GIG ++ +EKGE A + + ++ E E L+A+ WA L
Sbjct: 429 KCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAE----LEAMRWAV-L 483
Query: 162 NISHLQ-----VESDNLNLISHLRDKKQDIQWQS-KNHRESISLISKNFDQIQFLYSRRS 215
++S Q ESD+ LI L + D W S K + + + F +++F++ R
Sbjct: 484 SLSRFQYNYVIFESDSQVLIEILNN---DEIWPSLKPTIQDLQRLLSQFTEVKFVFIPRE 540
Query: 216 TNILADQLAK 225
N LA+++A+
Sbjct: 541 GNTLAERVAR 550
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 31/249 (12%)
Query: 1 MLHCTFARAIWLHFNIRT---SNFSSVLEWILYWKTLEETRITMMSKI-------MWFIW 50
+ C FAR +W I ++ L LYW E I + KI +W +W
Sbjct: 26 LFKCCFARLVWAISPIPAYPEGEWTDSLYANLYWVLNLEVEIPKLGKIGNLVPWLLWRLW 85
Query: 51 KARCEKSFGNKDYTPQHVLHMIQSFVTNTQEAKPPSMKSEQP--------KWSPPTPPFL 102
K+R E F K+Y VL + K+ P +W P ++
Sbjct: 86 KSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKASGPQVERNLSVQWKAPPYQWV 145
Query: 103 KINVDASFTSYMEPAGIGSIIHDEKGEFIIALADTI-RGQTAEECEGIAILKAIHWA--- 158
K N DA++ GIG I+ +E G + A + R + E E L+A+ WA
Sbjct: 146 KCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAE----LEALRWAVLT 201
Query: 159 -TDLNISHLQVESDNLNLISHLRDKKQDIQWQS-KNHRESISLISKNFDQIQFLYSRRST 216
+ N + ESD L++ L D W + + E I + +F++++F ++ R
Sbjct: 202 MSRFNYKRIIFESDAQALVNLL---NSDDFWPTLQPALEDIQQLLHHFEEVKFEFTPRGG 258
Query: 217 NILADQLAK 225
N +AD++A+
Sbjct: 259 NKVADRIAR 267
>AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:8344629-8345204 FORWARD
LENGTH=191 | 201606
Length = 191
Score = 62.0 bits (149), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 78 NTQEAKPPSMKSEQ-PKWSPPTPPFLKINVDASFTSYMEPAGIGSIIHDEKGEFIIALAD 136
N K KS + KW P ++K N D S + + +G+ II + +G +
Sbjct: 13 NDDNVKGGQTKSSRTDKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCG 72
Query: 137 TIRG-QTAEECEGIAILKAIHWATDLNISHLQVESDNLNLISHLRDKKQDIQWQSKNHRE 195
+G QT +E E A++ AI A DL ++ E DN+ + +R+K+ + + + + E
Sbjct: 73 KFQGRQTIKEAECTALIWAIQCAWDLGYRRVEFEGDNITVNRLIRNKETNP--RLRYYLE 130
Query: 196 SISLISKNFDQIQFLYSRRSTNILADQLAK 225
I SK F ++F + R N+ D LAK
Sbjct: 131 FIQQWSKAFTTVKFTFRHREQNVCVDVLAK 160