BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0810.1
(153 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G47070.1 | squamosa promoter binding protein-like 1 | Chr2:19... 145 9e-41
AT3G60030.1 | squamosa promoter-binding protein-like 12 | Chr3:2... 138 2e-38
AT1G20980.1 | squamosa promoter binding protein-like 14 | Chr1:7... 129 5e-35
AT1G76580.3 | Squamosa promoter-binding protein-like (SBP domain... 127 1e-34
AT1G76580.2 | Squamosa promoter-binding protein-like (SBP domain... 127 1e-34
>AT2G47070.1 | squamosa promoter binding protein-like 1 |
Chr2:19337144-19340552 FORWARD LENGTH=881 | 201606
Length = 881
Score = 145 bits (365), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 77/100 (77%)
Query: 47 LLKGYQRRNRVVCQVEDCGADLSNARDYHRRHTVCDTHLKSTQAVVGNVMQRFCQQCSRF 106
L + ++ VCQVE+C ADLS +DYHRRH VC+ H K+T A VG ++QRFCQQCSRF
Sbjct: 94 LFPAKKTKSGAVCQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRF 153
Query: 107 HLLQEFDEEKRSCRRRLAGHNKRRRKSQREAGFNGSSIDD 146
HLLQEFDE KRSCRRRLAGHNKRRRK+ E G NG+ DD
Sbjct: 154 HLLQEFDEGKRSCRRRLAGHNKRRRKTNPEPGANGNPSDD 193
>AT3G60030.1 | squamosa promoter-binding protein-like 12 |
Chr3:22165856-22169410 REVERSE LENGTH=927 | 201606
Length = 927
Score = 138 bits (348), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 75/90 (83%)
Query: 57 VVCQVEDCGADLSNARDYHRRHTVCDTHLKSTQAVVGNVMQRFCQQCSRFHLLQEFDEEK 116
+ CQV++CGADLS +DYHRRH VC+ H K+T A+VG +MQRFCQQCSRFH+L+EFDE K
Sbjct: 125 ICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGK 184
Query: 117 RSCRRRLAGHNKRRRKSQREAGFNGSSIDD 146
RSCRRRLAGHNKRRRK+ + NG+S+ D
Sbjct: 185 RSCRRRLAGHNKRRRKANPDTIGNGTSMSD 214
>AT1G20980.1 | squamosa promoter binding protein-like 14 |
Chr1:7325042-7328933 FORWARD LENGTH=1035 | 201606
Length = 1035
Score = 129 bits (323), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 69/84 (82%)
Query: 50 GYQRRNRVVCQVEDCGADLSNARDYHRRHTVCDTHLKSTQAVVGNVMQRFCQQCSRFHLL 109
G N +CQV++C DLS+A+DYHRRH VC+ H K+T+A+VG MQRFCQQCSRFHLL
Sbjct: 111 GSPGGNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLL 170
Query: 110 QEFDEEKRSCRRRLAGHNKRRRKS 133
EFDE KRSCRRRLAGHN+RRRK+
Sbjct: 171 SEFDEGKRSCRRRLAGHNRRRRKT 194
>AT1G76580.3 | Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein |
Chr1:28734600-28737455 FORWARD LENGTH=699 | 201606
Length = 699
Score = 127 bits (320), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 59 CQVEDCGADLSNARDYHRRHTVCDTHLKSTQAVVGNVMQRFCQQCSRFHLLQEFDEEKRS 118
CQV++C DLS A+DYHRRH VC+ H K+T+A+VG MQRFCQQCSRFHLL EFDE KRS
Sbjct: 114 CQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRS 173
Query: 119 CRRRLAGHNKRRRKSQREA 137
CRRRL GHN+RRRK+Q +A
Sbjct: 174 CRRRLDGHNRRRRKTQPDA 192
>AT1G76580.2 | Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein |
Chr1:28734600-28737305 FORWARD LENGTH=694 | 201606
Length = 694
Score = 127 bits (319), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 67/79 (84%)
Query: 59 CQVEDCGADLSNARDYHRRHTVCDTHLKSTQAVVGNVMQRFCQQCSRFHLLQEFDEEKRS 118
CQV++C DLS A+DYHRRH VC+ H K+T+A+VG MQRFCQQCSRFHLL EFDE KRS
Sbjct: 114 CQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRS 173
Query: 119 CRRRLAGHNKRRRKSQREA 137
CRRRL GHN+RRRK+Q +A
Sbjct: 174 CRRRLDGHNRRRRKTQPDA 192