BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0970.1
(108 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 92 5e-24
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 93 3e-23
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 93 3e-23
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 51 3e-09
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 92.0 bits (227), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 1 MQILKKILRYVKGTIDFGVSITVGNLQKLNRYSDFDWVGCPDARISTTGFYVVLDNSLIS 60
+LK++LRYVKGTI G+ I + + + D DW GC R STTGF L ++IS
Sbjct: 136 FDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIIS 195
Query: 61 WGSKKQQTVARSLTEAEYRALSTVASELLW 90
W +K+Q TV+RS TE EYRAL+ A+EL W
Sbjct: 196 WSAKRQPTVSRSSTETEYRALALTAAELTW 225
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 93.2 bits (230), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%)
Query: 2 QILKKILRYVKGTIDFGVSITVGNLQKLNRYSDFDWVGCPDARISTTGFYVVLDNSLISW 61
Q + KIL Y+KGT+ G+ + +L +SD + C D R ST G+ + L SLISW
Sbjct: 415 QAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISW 474
Query: 62 GSKKQQTVARSLTEAEYRALSTVASELLWILYLLIELNHPLSHP 105
SKKQQ V++S EAEYRALS E++W+ EL PLS P
Sbjct: 475 KSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKP 518
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 93.2 bits (230), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%)
Query: 2 QILKKILRYVKGTIDFGVSITVGNLQKLNRYSDFDWVGCPDARISTTGFYVVLDNSLISW 61
Q + KIL Y+KGT+ G+ + +L +SD + C D R ST G+ + L SLISW
Sbjct: 415 QAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISW 474
Query: 62 GSKKQQTVARSLTEAEYRALSTVASELLWILYLLIELNHPLSHP 105
SKKQQ V++S EAEYRALS E++W+ EL PLS P
Sbjct: 475 KSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKP 518
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 50.8 bits (120), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 1 MQILKKILRYVKGTIDFGVSITVGNLQKLNRYSDFDWVGCPDARISTTGF 50
MQ + K+L YVKGT+ G+ + + +L ++D DW CPD R S TGF
Sbjct: 29 MQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGF 78