BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0990.1
(193 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G37630.2 | cyclin d5%3B1 | Chr4:17679497-17680530 FORWARD LEN... 110 8e-30
AT4G37630.3 | cyclin d5%3B1 | Chr4:17679497-17680530 FORWARD LEN... 109 2e-29
AT4G37630.1 | cyclin d5%3B1 | Chr4:17679497-17680788 FORWARD LEN... 109 7e-29
AT2G22490.2 | Cyclin D2%3B1 | Chr2:9554157-9555873 REVERSE LENGT... 100 4e-25
AT2G22490.1 | Cyclin D2%3B1 | Chr2:9554157-9555873 REVERSE LENGT... 100 4e-25
>AT4G37630.2 | cyclin d5%3B1 | Chr4:17679497-17680530 FORWARD
LENGTH=262 | 201606
Length = 262
Score = 110 bits (276), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 115/217 (52%), Gaps = 46/217 (21%)
Query: 10 SLTSLLCQESTDCFDEELKKE-ERGDQQESFLNLGYSKNDDKHIEMMIKRESNNFGTKNS 68
SL LC ES +E+ + ER D+QE + + +D+ ++ ++ +E+ F T
Sbjct: 7 SLALFLCHESESSLNEDDDETIERSDKQEP--HFTTTIDDEDYVADLVLKENLRFET--- 61
Query: 69 EFLEMGVLKSDNQLKSSRLDAIKWILKS-----------------------------EES 99
L S S RL AI WIL + +E+
Sbjct: 62 -------LPSKTTSSSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGKDET 114
Query: 100 WAIQLLSIACLSLAAKMEELKVPASSKF-QSEDYNFESKVIQKMELMVLTTLEWKMGSIS 158
WA++LLS+ACLSLAAKMEE VP S++ Q D+ F+ VI+K EL++L+TL+WKM I+
Sbjct: 115 WAMRLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLIT 174
Query: 159 PFSYIDYFIINFS--NGNLSKDLV-FKSIELIFAITK 192
PF Y +YF+ S N ++SKDLV +S + + A+TK
Sbjct: 175 PFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTK 211
>AT4G37630.3 | cyclin d5%3B1 | Chr4:17679497-17680530 FORWARD
LENGTH=264 | 201606
Length = 264
Score = 109 bits (273), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 115/219 (52%), Gaps = 48/219 (21%)
Query: 10 SLTSLLCQESTDCFDEELKKE-ERGDQQESFLNLGYSKNDDKHIEMMIKRESNNFGTKNS 68
SL LC ES +E+ + ER D+QE + + +D+ ++ ++ +E+ F T
Sbjct: 7 SLALFLCHESESSLNEDDDETIERSDKQEP--HFTTTIDDEDYVADLVLKENLRFET--- 61
Query: 69 EFLEMGVLKSDNQLKSSRLDAIKWILKS-------------------------------E 97
L S S RL AI WIL + +
Sbjct: 62 -------LPSKTTSSSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKD 114
Query: 98 ESWAIQLLSIACLSLAAKMEELKVPASSKF-QSEDYNFESKVIQKMELMVLTTLEWKMGS 156
E+WA++LLS+ACLSLAAKMEE VP S++ Q D+ F+ VI+K EL++L+TL+WKM
Sbjct: 115 ETWAMRLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNL 174
Query: 157 ISPFSYIDYFIINFS--NGNLSKDLV-FKSIELIFAITK 192
I+PF Y +YF+ S N ++SKDLV +S + + A+TK
Sbjct: 175 ITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTK 213
>AT4G37630.1 | cyclin d5%3B1 | Chr4:17679497-17680788 FORWARD
LENGTH=323 | 201606
Length = 323
Score = 109 bits (273), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 115/219 (52%), Gaps = 48/219 (21%)
Query: 10 SLTSLLCQESTDCFDEELKKE-ERGDQQESFLNLGYSKNDDKHIEMMIKRESNNFGTKNS 68
SL LC ES +E+ + ER D+QE + + +D+ ++ ++ +E+ F T
Sbjct: 7 SLALFLCHESESSLNEDDDETIERSDKQEP--HFTTTIDDEDYVADLVLKENLRFET--- 61
Query: 69 EFLEMGVLKSDNQLKSSRLDAIKWILKS-------------------------------E 97
L S S RL AI WIL + +
Sbjct: 62 -------LPSKTTSSSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKD 114
Query: 98 ESWAIQLLSIACLSLAAKMEELKVPASSKF-QSEDYNFESKVIQKMELMVLTTLEWKMGS 156
E+WA++LLS+ACLSLAAKMEE VP S++ Q D+ F+ VI+K EL++L+TL+WKM
Sbjct: 115 ETWAMRLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNL 174
Query: 157 ISPFSYIDYFIINFS--NGNLSKDLV-FKSIELIFAITK 192
I+PF Y +YF+ S N ++SKDLV +S + + A+TK
Sbjct: 175 ITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTK 213
>AT2G22490.2 | Cyclin D2%3B1 | Chr2:9554157-9555873 REVERSE
LENGTH=362 | 201606
Length = 362
Score = 100 bits (249), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
Query: 94 LKSEESWAIQLLSIACLSLAAKMEELKVPASSKFQSED--YNFESKVIQKMELMVLTTLE 151
L ++ WA QLL+++CLSLA+KMEE VP Q ED + FE+K I++MEL+V+TTL
Sbjct: 134 LPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLN 193
Query: 152 WKMGSISPFSYIDYFIINFSNGNLSKDLVFKSIELIFAITKG 193
W++ +++PFS+IDYF+ S G++S++L+++S I TK
Sbjct: 194 WRLQALTPFSFIDYFVDKIS-GHVSENLIYRSSRFILNTTKA 234
>AT2G22490.1 | Cyclin D2%3B1 | Chr2:9554157-9555873 REVERSE
LENGTH=361 | 201606
Length = 361
Score = 100 bits (249), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
Query: 94 LKSEESWAIQLLSIACLSLAAKMEELKVPASSKFQSED--YNFESKVIQKMELMVLTTLE 151
L ++ WA QLL+++CLSLA+KMEE VP Q ED + FE+K I++MEL+V+TTL
Sbjct: 134 LPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLN 193
Query: 152 WKMGSISPFSYIDYFIINFSNGNLSKDLVFKSIELIFAITKG 193
W++ +++PFS+IDYF+ S G++S++L+++S I TK
Sbjct: 194 WRLQALTPFSFIDYFVDKIS-GHVSENLIYRSSRFILNTTKA 234