BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1000.1
(408 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 152 1e-39
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 152 1e-39
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 100 4e-24
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 60 3e-11
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 152 bits (383), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 175/357 (49%), Gaps = 28/357 (7%)
Query: 1 MKVHEGFKLPEGKPRVMYSV-KLNRALYGLKQSGRMWYNRLSEYLTKEGYVNDPICPCVF 59
MK+ G+ +G +V L +++YGLKQ+ R W+ + S L G+V F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 60 IKKSYIGFAIIAIYVDNINIIGTVED--VSKAAEYLKKEFEMKDLGKTKFCIGLQIERTT 117
+K + F + +YVD+I II + D V + LK F+++DLG K+ +GL+I R+
Sbjct: 270 LKITATLFLCVLVYVDDI-IICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSA 328
Query: 118 NGILVHQNLYNEKVLNKFRMDTAYPLSTPMVVRSLDITKDP---FRPKEDNEALLGPKVP 174
GI + Q Y +L++ + P S PM DP F + + K
Sbjct: 329 AGINICQRKYALDLLDETGLLGCKPSSVPM---------DPSVTFSAHSGGD-FVDAKA- 377
Query: 175 YLSAIGVLLYLAQCTRPDISFAVNLLVRFSSAPTKQHWMGVKHILRYLRGTTDMGLFYSK 234
Y IG L+YL Q TR DISFAVN L +FS AP H V IL Y++GT GLFYS
Sbjct: 378 YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 436
Query: 235 NSSNDSQVVGYTDAGYFSDPHKGISQTGYIFTSGGTAFSWRSSKQSMPATSSNHSEIIVL 294
+ QV ++DA + S S GY G + SW+S KQ + + SS +E L
Sbjct: 437 QAEMQLQV--FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRAL 494
Query: 295 HEATRKCVWLRSIISHIKKIYDLPGITKSPTIIYEDNAACIAQIKEGYIKGDKTKHI 351
AT + +WL ++ LP PT+++ DN A I I + ++TKHI
Sbjct: 495 SFATDEMMWLAQFFRELQ----LP--LSKPTLLFCDNTAAI-HIATNAVFHERTKHI 544
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 152 bits (383), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 175/357 (49%), Gaps = 28/357 (7%)
Query: 1 MKVHEGFKLPEGKPRVMYSV-KLNRALYGLKQSGRMWYNRLSEYLTKEGYVNDPICPCVF 59
MK+ G+ +G +V L +++YGLKQ+ R W+ + S L G+V F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 60 IKKSYIGFAIIAIYVDNINIIGTVED--VSKAAEYLKKEFEMKDLGKTKFCIGLQIERTT 117
+K + F + +YVD+I II + D V + LK F+++DLG K+ +GL+I R+
Sbjct: 270 LKITATLFLCVLVYVDDI-IICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSA 328
Query: 118 NGILVHQNLYNEKVLNKFRMDTAYPLSTPMVVRSLDITKDP---FRPKEDNEALLGPKVP 174
GI + Q Y +L++ + P S PM DP F + + K
Sbjct: 329 AGINICQRKYALDLLDETGLLGCKPSSVPM---------DPSVTFSAHSGGD-FVDAKA- 377
Query: 175 YLSAIGVLLYLAQCTRPDISFAVNLLVRFSSAPTKQHWMGVKHILRYLRGTTDMGLFYSK 234
Y IG L+YL Q TR DISFAVN L +FS AP H V IL Y++GT GLFYS
Sbjct: 378 YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 436
Query: 235 NSSNDSQVVGYTDAGYFSDPHKGISQTGYIFTSGGTAFSWRSSKQSMPATSSNHSEIIVL 294
+ QV ++DA + S S GY G + SW+S KQ + + SS +E L
Sbjct: 437 QAEMQLQV--FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRAL 494
Query: 295 HEATRKCVWLRSIISHIKKIYDLPGITKSPTIIYEDNAACIAQIKEGYIKGDKTKHI 351
AT + +WL ++ LP PT+++ DN A I I + ++TKHI
Sbjct: 495 SFATDEMMWLAQFFRELQ----LP--LSKPTLLFCDNTAAI-HIATNAVFHERTKHI 544
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 100 bits (249), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 21/239 (8%)
Query: 70 IAIYVDNINIIGTVEDVSKAAEY-LKKEFEMKDLGKTKFCIGLQIERTTNGILVHQNLYN 128
+ +YVD+I + G+ + + L F MKDLG + +G+QI+ +G+ + Q Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 129 EKVLNKFRMDTAYPLSTPMVVRSLDITKDPFRPKEDNEALLGPKVP----YLSAIGVLLY 184
E++LN M P+STP+ P + N ++ K P + S +G L Y
Sbjct: 63 EQILNNAGMLDCKPMSTPL-------------PLKLNSSVSTAKYPDPSDFRSIVGALQY 109
Query: 185 LAQCTRPDISFAVNLLVRFSSAPTKQHWMGVKHILRYLRGTTDMGLFYSKNSSNDSQVVG 244
L TRPDIS+AVN++ + PT + +K +LRY++GT GL+ KNS + Q
Sbjct: 110 LT-LTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQ--A 166
Query: 245 YTDAGYFSDPHKGISQTGYIFTSGGTAFSWRSSKQSMPATSSNHSEIIVLHEATRKCVW 303
+ D+ + S TG+ G SW + +Q + SS +E L + W
Sbjct: 167 FCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 60.5 bits (145), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 183 LYLAQCTRPDISFAVNLLVRFSSAPTKQHWMGVKHILRYLRGTTDMGLFYSKNSSNDSQV 242
+YL TRPD++FAVN L +FSSA V +L Y++GT GLFYS +++D Q+
Sbjct: 1 MYLT-ITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYS--ATSDLQL 57
Query: 243 VGYTDAGYFSDPHKGISQTGY 263
+ D+ + S P S TG+
Sbjct: 58 KAFADSDWASCPDTRRSVTGF 78