BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1270.1
(340 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 7e-46
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 7e-46
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 147 4e-42
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 56 7e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (423), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 166/313 (53%), Gaps = 12/313 (3%)
Query: 1 MLKHGFRRSDYDCCVYIKKLRESDFIYLLLYVDDMLIAYRSMVEIDKLKSQLSQEFEMKD 60
++ GF +S D Y K+ + F+ +L+YVDD++I + +D+LKSQL F+++D
Sbjct: 254 LIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 61 MGAAKNILGMEIKRERSSKKLYLNQKGYIERVVSRFGMQDAKAVSTPLAPHFRLSGRQSP 120
+G K LG+EI RS+ + + Q+ Y ++ G+ K S P+ P S
Sbjct: 313 LGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG- 369
Query: 121 TTTVEKDHMDRIPYASAVGILMYAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRY 180
D +D Y +G LMY + TR DIS AV+ +S+F P H +AV +L Y
Sbjct: 370 -----GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHY 423
Query: 181 LKGTVDTGLCFGGDT-CQVSGYVDSDYAGDLDRRRSTTGYVFRVHSAPVSWRSMLQSTVA 239
+KGTV GL + Q+ + D+ + D RRST GY + ++ +SW+S Q V+
Sbjct: 424 IKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVS 483
Query: 240 LSTTEAEYMAMAEGVKEALWLWGLLDDLGIK-QECVDVWCDSQSAIHLAKNQVHHARTKH 298
S+ EAEY A++ E +WL +L + + ++CD+ +AIH+A N V H RTKH
Sbjct: 484 KSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKH 543
Query: 299 IDVSRMKLQEEDI 311
I+ ++E +
Sbjct: 544 IESDCHSVRERSV 556
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (423), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 166/313 (53%), Gaps = 12/313 (3%)
Query: 1 MLKHGFRRSDYDCCVYIKKLRESDFIYLLLYVDDMLIAYRSMVEIDKLKSQLSQEFEMKD 60
++ GF +S D Y K+ + F+ +L+YVDD++I + +D+LKSQL F+++D
Sbjct: 254 LIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 61 MGAAKNILGMEIKRERSSKKLYLNQKGYIERVVSRFGMQDAKAVSTPLAPHFRLSGRQSP 120
+G K LG+EI RS+ + + Q+ Y ++ G+ K S P+ P S
Sbjct: 313 LGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG- 369
Query: 121 TTTVEKDHMDRIPYASAVGILMYAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRY 180
D +D Y +G LMY + TR DIS AV+ +S+F P H +AV +L Y
Sbjct: 370 -----GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHY 423
Query: 181 LKGTVDTGLCFGGDT-CQVSGYVDSDYAGDLDRRRSTTGYVFRVHSAPVSWRSMLQSTVA 239
+KGTV GL + Q+ + D+ + D RRST GY + ++ +SW+S Q V+
Sbjct: 424 IKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVS 483
Query: 240 LSTTEAEYMAMAEGVKEALWLWGLLDDLGIK-QECVDVWCDSQSAIHLAKNQVHHARTKH 298
S+ EAEY A++ E +WL +L + + ++CD+ +AIH+A N V H RTKH
Sbjct: 484 KSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKH 543
Query: 299 IDVSRMKLQEEDI 311
I+ ++E +
Sbjct: 544 IESDCHSVRERSV 556
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 147 bits (370), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 131/235 (55%), Gaps = 11/235 (4%)
Query: 26 IYLLLYVDDMLIAYRSMVEIDKLKSQLSQEFEMKDMGAAKNILGMEIKRERSSKKLYLNQ 85
+YLLLYVDD+L+ S ++ L QLS F MKD+G LG++IK S L+L+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 86 KGYIERVVSRFGMQDAKAVSTPLAPHFRLSGRQSPTTTVEKDHMDRIPYASAVGILMYAM 145
Y E++++ GM D K +STPL L S +T D D + S VG L Y +
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP----LKLNSSVSTAKYPDPSD---FRSIVGALQY-L 110
Query: 146 VCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSGYVDS 204
TRPDIS AV++V + M P ++ +K VLRY+KGT+ GL ++ V + DS
Sbjct: 111 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDS 170
Query: 205 DYAGDLDRRRSTTGYVFRVHSAPVSWRSMLQSTVALSTTEAEYMAMAEGVKEALW 259
D+AG RRSTTG+ + +SW + Q TV+ S+TE EY A+A E W
Sbjct: 171 DWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 56.2 bits (134), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 142 MYAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSG 200
MY + TRPD++ AV+ +S+F + +AV VL Y+KGTV GL + + Q+
Sbjct: 1 MY-LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 201 YVDSDYAGDLDRRRSTTGY 219
+ DSD+A D RRS TG+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78