BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000081.1_g1340.1
         (114 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18030.2 | Peptide methionine sulfoxide reductase family prot...   106   4e-30
AT2G18030.1 | Peptide methionine sulfoxide reductase family prot...   106   3e-29

>AT2G18030.2 | Peptide methionine sulfoxide reductase family protein
           | Chr2:7840207-7841206 FORWARD LENGTH=192 | 201606
          Length = 192

 Score =  106 bits (265), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 48/78 (61%), Positives = 65/78 (83%), Gaps = 1/78 (1%)

Query: 1   MVDEVLSIRLPDHISETVMHQSTNQPLKISVFALGSFWISEAVFGCLHGVIRISVGYTGG 60
           ++D+ +SIR+ + IS+TV+  S ++PLK +VFALGSFW SEA FGC++GV+R S GY GG
Sbjct: 27  LLDKTVSIRISNQISDTVVD-SPDRPLKSAVFALGSFWRSEAAFGCINGVVRTSAGYAGG 85

Query: 61  SKINPEFRSLGDHAESVQ 78
           +K NPE+R+LGDHAESVQ
Sbjct: 86  TKTNPEYRNLGDHAESVQ 103


>AT2G18030.1 | Peptide methionine sulfoxide reductase family protein
           | Chr2:7840207-7841496 FORWARD LENGTH=254 | 201606
          Length = 254

 Score =  106 bits (264), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 48/78 (61%), Positives = 65/78 (83%), Gaps = 1/78 (1%)

Query: 1   MVDEVLSIRLPDHISETVMHQSTNQPLKISVFALGSFWISEAVFGCLHGVIRISVGYTGG 60
           ++D+ +SIR+ + IS+TV+  S ++PLK +VFALGSFW SEA FGC++GV+R S GY GG
Sbjct: 27  LLDKTVSIRISNQISDTVV-DSPDRPLKSAVFALGSFWRSEAAFGCINGVVRTSAGYAGG 85

Query: 61  SKINPEFRSLGDHAESVQ 78
           +K NPE+R+LGDHAESVQ
Sbjct: 86  TKTNPEYRNLGDHAESVQ 103

Top