BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000081.1_g1500.1
         (1162 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG00860.1 | DNA/RNA polymerases superfamily protein | ChrM:235...   100   3e-24

>ATMG00860.1 | DNA/RNA polymerases superfamily protein |
           ChrM:235916-236392 FORWARD LENGTH=158 | 201606
          Length = 158

 Score =  100 bits (249), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 75/130 (57%), Gaps = 3/130 (2%)

Query: 410 HLREVFRVLKENQLYVKEEKCSFAQKHIGFLGH--IIGDGHIRMEMKKVKAIQEWKVPTS 467
           HL  V ++ +++Q Y   +KC+F Q  I +LGH  II    +  +  K++A+  W  P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 468 VSELRSFLGLANYYRKFIRRYSARAAPLTDLSKKDRPWVWSKECQEAFEDMKQQVANDPV 527
            +ELR FLGL  YYR+F++ Y     PLT+L KK+    W++    AF+ +K  V   PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSL-KWTEMAALAFKALKGAVTTLPV 121

Query: 528 LALPDTSKPF 537
           LALPD   PF
Sbjct: 122 LALPDLKLPF 131

Top