BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1520.1
(197 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G52140.1 | Avr9/Cf-9 rapidly elicited protein | Chr1:19407559... 127 1e-36
AT3G16330.1 | Avr9/Cf-9 rapidly elicited protein | Chr3:5535263-... 116 2e-32
AT4G29110.1 | cotton fiber protein | Chr4:14348866-14349468 FORW... 102 3e-27
AT4G32860.1 | Avr9/Cf-9 rapidly elicited protein | Chr4:15856710... 77 2e-17
>AT1G52140.1 | Avr9/Cf-9 rapidly elicited protein |
Chr1:19407559-19408185 REVERSE LENGTH=208 | 201606
Length = 208
Score = 127 bits (319), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 112/213 (52%), Gaps = 42/213 (19%)
Query: 8 LAKKLWNIVRIMFLMMRKGISKRKFMVDLHLMMKRGKIVGKSIGDLMFHHH------TNL 61
++KKLWNIVR + M+RKG+SK K + D + +KRGK +LMFH +
Sbjct: 7 ISKKLWNIVRFLLYMIRKGVSKNKLIADFNATLKRGK-------NLMFHQRRRVHAGSTA 59
Query: 62 SCRSQDPHLSFITPREYEFSCNNSP--AFPFR-ATHKRKNHHHNHHHHHHHRSYLSFANP 118
S + + +EYEFSC+N+P +FPF RK H+N + P
Sbjct: 60 SAALNATSATASSRQEYEFSCSNTPNYSFPFSNMAFMRKKSHNNL--------FTCGQTP 111
Query: 119 NSADNDLTTAAAVKKVLEMFNNELEA------------SPVVKGFGRSPFIRQLRITDSP 166
+ D+D+ AA + VLE+ N E SP GFG++P +R LR+TDSP
Sbjct: 112 QTLDDDV---AAARAVLELLNGVGEKGNVTPADLTVALSPYFPGFGQTPLVRPLRVTDSP 168
Query: 167 FPLKNDDDD---AHVDKEAEEFIEKFYQQLRLQ 196
FPL ++ D HVDK A++FI+KFY+ L Q
Sbjct: 169 FPLTPENGDVANGHVDKAADDFIKKFYKNLNQQ 201
>AT3G16330.1 | Avr9/Cf-9 rapidly elicited protein |
Chr3:5535263-5535880 FORWARD LENGTH=205 | 201606
Length = 205
Score = 116 bits (290), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 113/212 (53%), Gaps = 45/212 (21%)
Query: 8 LAKKLWNIVRIMFLMMRKGISKRKFMVDLHLMMKRGKIVGKSIGDLMFHHHTNLSCRSQD 67
++KKL NIVR + M+ KGISK+K + D + +KRGK +LMFH+ + +
Sbjct: 7 ISKKLGNIVRFVLYMLHKGISKQKLLADFNATLKRGK-------NLMFHNRRRVPGSAVA 59
Query: 68 PHLSFITPREYEFSCNNSP--AFPFRATHKRKNHHHNHHHHHHHRSYLSFAN-PNSADND 124
H EYEFSC+++P FPF +K HHN S S P + D+D
Sbjct: 60 SH----PQNEYEFSCSDTPNYTFPFNMAAFKKKSHHN--------SLFSCGQAPPTLDDD 107
Query: 125 LTTAAAVKKVLEMFNN-------------ELEA----SPVVKGFGRS-PFIRQLRITDSP 166
+ + A VLE+ N+ +EA SP + GFGRS +R LR+TDSP
Sbjct: 108 TSVSRA---VLELLNSGGDHDQGSNTPAFSIEALTALSPYLPGFGRSTSSVRPLRVTDSP 164
Query: 167 FPLKNDDD--DAHVDKEAEEFIEKFYQQLRLQ 196
FPL+ + D + HVDK A+EFI+KFY+ L Q
Sbjct: 165 FPLREEGDVANGHVDKAADEFIKKFYKNLYQQ 196
>AT4G29110.1 | cotton fiber protein | Chr4:14348866-14349468 FORWARD
LENGTH=200 | 201606
Length = 200
Score = 102 bits (255), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 99/206 (48%), Gaps = 46/206 (22%)
Query: 1 MEPAQPVLAKKLWNIVRIMFLMMRKGISKRKFMVDLHLMMKRGKIVGKSIGDLMFHHHTN 60
ME V AK+LW +VRI+F +++ G K K M+DL+LM+KRG K+I TN
Sbjct: 14 MEQNAQVAAKRLWKVVRIVFCVLKTGTVKNKLMLDLNLMLKRG---NKAI--------TN 62
Query: 61 LSCRSQDPHLSFITP----REYEFSCNNSPAFPFRATHKRKNHHHNHHHHHHHRSYLSFA 116
L RS ++ R+Y+ PF KRK H + +
Sbjct: 63 LRRRSSSTGSHDVSSSSRVRDYD---------PFAFISKRKRRVHGGYDNEED------- 106
Query: 117 NPNSADNDLTTAAAVKKVLEMFNNELEASPVVKGFGRSPFI-----RQLRITDSPFPLKN 171
AAVKKV E+ + + + SP I RQLR+TDSPFPL +
Sbjct: 107 ---------AVEAAVKKVFELLGENDKKTVATESARESPLIMSPAVRQLRVTDSPFPLDD 157
Query: 172 DDDDAH-VDKEAEEFIEKFYQQLRLQ 196
D H VDK AEEFI+KFY+ L+LQ
Sbjct: 158 GGDHDHVVDKAAEEFIKKFYKNLKLQ 183
>AT4G32860.1 | Avr9/Cf-9 rapidly elicited protein |
Chr4:15856710-15857309 REVERSE LENGTH=199 | 201606
Length = 199
Score = 77.4 bits (189), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 51/216 (23%)
Query: 1 MEPAQPVLAKKLWNIVRIMFLMMRK--GISKRKFMVDL--HLMMKRGKIVGKSIGDLMFH 56
ME V KKL ++ +++ ++K S+ K + L HL+ KRGKI+ KS+ + +
Sbjct: 7 MEVCSTVTTKKLSSLAKLILFTIQKVSDASRHKLLTTLDPHLLAKRGKILRKSLNEAVST 66
Query: 57 HHTNLSCRS---QDPHLSFITP----REYEFSCNNSPAFPFRATHKRKNHHHNHHHH--- 106
H+ ++CR QD SFI+P EYEFSC+++P AT K N H+
Sbjct: 67 SHSRITCRPSDHQDVRSSFISPVPLQLEYEFSCSSTPPRRSYATTVSKGRRSNGSHNRPL 126
Query: 107 ---HHHRSYLSFAN-PNSADN--DLTTAAAVKKVLEMFNNELEASPVVKGFGRSPFIRQL 160
++Y+ + P D+ D AAAV + +E+
Sbjct: 127 INKRQRQAYIRYNTLPKVRDSIWDRHVAAAVFPDVASSTGTMES---------------- 170
Query: 161 RITDSPFPLKNDDDDAHVDKEAEEFIEKFYQQLRLQ 196
HVD+ AEEFI+ FY+QLRLQ
Sbjct: 171 ---------------CHVDRAAEEFIQSFYRQLRLQ 191