BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000081.1_g1560.1
         (174 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1...    55   7e-09

>AT1G43760.1 | DNAse I-like superfamily protein |
           Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
          Length = 626

 Score = 54.7 bits (130), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 43/95 (45%)

Query: 29  ISRLSTAEEIKEVVMLRGSTQSPGPDDLSCHFYQHNWDRVGTKLVTFIPSVFSIGTFDPS 88
           +S L + +EI   V      ++PGPD  +  F+  +W  V    +  +   F  G     
Sbjct: 527 LSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKR 586

Query: 89  INNTTLALIPKVQSPSFASDFRSIAPCNTIYKFIT 123
            N T + LIPKV      S FR ++ C  +YK IT
Sbjct: 587 FNATAITLIPKVTGVDQLSMFRPVSCCTVVYKIIT 621


Top