BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1640.1
(341 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 346 e-111
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 346 e-111
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 129 2e-35
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 76 2e-16
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 49 3e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 346 bits (888), Expect = e-111, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 232/327 (70%), Gaps = 5/327 (1%)
Query: 1 MVAEIKALESSNTWYLFPLPPGKRHISSKWVYKIKYRFDRSVDRYKARLVAKGYTQIEGL 60
M EI A+E+++TW + LPP K+ I KWVYKIKY D +++RYKARLVAKGYTQ EG+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYHDTFAPVAKFVTVRVLLSFASIKGLTLHQFDVNNAFLQGDLDEEVFMKPPPRFS-RKG 119
D+ +TF+PV K +V+++L+ ++I TLHQ D++NAFL GDLDEE++MK PP ++ R+G
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 120 EQL----VCRLNKSLYGLKQASHQWFAKFSSTLLQHGFIQSLADYSLFTYTSKNVSLYVL 175
+ L VC L KS+YGLKQAS QWF KFS TL+ GF+QS +D++ F + + L VL
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL 281
Query: 176 VYVDDIIITDTDDSAISRLMSFLHKTFSLKDLGRLQYFLGIGVSRSSQGISLSQRKYTLG 235
VYVDDIII +D+A+ L S L F L+DLG L+YFLG+ ++RS+ GI++ QRKY L
Sbjct: 282 VYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALD 341
Query: 236 IIANSGLIGSKPSPFPMEQKLNLPSSSRDPIPDPSIYRRLIGRLLYLMVTRPDITFSVNY 295
++ +GL+G KPS PM+ + + S D YRRLIGRL+YL +TR DI+F+VN
Sbjct: 342 LLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNK 401
Query: 296 LSQFLQSPTSSHLDAAHRVIRYLKGSL 322
LSQF ++P +H A +++ Y+KG++
Sbjct: 402 LSQFSEAPRLAHQQAVMKILHYIKGTV 428
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 346 bits (888), Expect = e-111, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 232/327 (70%), Gaps = 5/327 (1%)
Query: 1 MVAEIKALESSNTWYLFPLPPGKRHISSKWVYKIKYRFDRSVDRYKARLVAKGYTQIEGL 60
M EI A+E+++TW + LPP K+ I KWVYKIKY D +++RYKARLVAKGYTQ EG+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYHDTFAPVAKFVTVRVLLSFASIKGLTLHQFDVNNAFLQGDLDEEVFMKPPPRFS-RKG 119
D+ +TF+PV K +V+++L+ ++I TLHQ D++NAFL GDLDEE++MK PP ++ R+G
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 120 EQL----VCRLNKSLYGLKQASHQWFAKFSSTLLQHGFIQSLADYSLFTYTSKNVSLYVL 175
+ L VC L KS+YGLKQAS QWF KFS TL+ GF+QS +D++ F + + L VL
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL 281
Query: 176 VYVDDIIITDTDDSAISRLMSFLHKTFSLKDLGRLQYFLGIGVSRSSQGISLSQRKYTLG 235
VYVDDIII +D+A+ L S L F L+DLG L+YFLG+ ++RS+ GI++ QRKY L
Sbjct: 282 VYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALD 341
Query: 236 IIANSGLIGSKPSPFPMEQKLNLPSSSRDPIPDPSIYRRLIGRLLYLMVTRPDITFSVNY 295
++ +GL+G KPS PM+ + + S D YRRLIGRL+YL +TR DI+F+VN
Sbjct: 342 LLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNK 401
Query: 296 LSQFLQSPTSSHLDAAHRVIRYLKGSL 322
LSQF ++P +H A +++ Y+KG++
Sbjct: 402 LSQFSEAPRLAHQQAVMKILHYIKGTV 428
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 129 bits (324), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
Query: 172 LYVLVYVDDIIITDTDDSAISRLMSFLHKTFSLKDLGRLQYFLGIGVSRSSQGISLSQRK 231
+Y+L+YVDDI++T + ++ ++ L+ L TFS+KDLG + YFLGI + G+ LSQ K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 232 YTLGIIANSGLIGSKPSPFPMEQKLNLPSSSRDPIPDPSIYRRLIGRLLYLMVTRPDITF 291
Y I+ N+G++ KP P+ KLN S S PDPS +R ++G L YL +TRPDI++
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 292 SVNYLSQFLQSPTSSHLDAAHRVIRYLKGSL 322
+VN + Q + PT + D RV+RY+KG++
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTI 150
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 76.3 bits (186), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%)
Query: 1 MVAEIKALESSNTWYLFPLPPGKRHISSKWVYKIKYRFDRSVDRYKARLVAKGYTQIEGL 60
M E+ AL + TW L P P + + KWV+K K D ++DR KARLVAKG+ Q EG+
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103
Query: 61 DYHDTFAPVAKFVTVRVLLSFA 82
+ +T++PV + T+R +L+ A
Sbjct: 104 YFVETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 48.9 bits (115), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 33/43 (76%)
Query: 280 LYLMVTRPDITFSVNYLSQFLQSPTSSHLDAAHRVIRYLKGSL 322
+YL +TRPD+TF+VN LSQF + ++ + A ++V+ Y+KG++
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTV 43