BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1700.1
(431 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G13320.1 | hypothetical protein | Chr4:7753436-7754086 FORWAR... 52 1e-07
>AT4G13320.1 | hypothetical protein | Chr4:7753436-7754086 FORWARD
LENGTH=216 | 201606
Length = 216
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 238 KPCRVPISIGKYYKQEVVCDVTDMDAR--HVLLGRPWKWNTDCTFRGRSNTYTFDWEGHK 295
+ CRVP+SIG +YK +V C V +M+ +L G PW + T GR ++ W +
Sbjct: 154 ETCRVPVSIGDFYKDKVTCYVVNMEEEEDQLLFGGPWLYRVQATHNGRDDSCMIIWNHNM 213
Query: 296 ILM 298
IL+
Sbjct: 214 ILL 216