BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1750.1
(326 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G56020.1 | serine/arginine repetitive matrix-like protein | C... 145 3e-40
AT1G79060.1 | TPRXL | Chr1:29741873-29743063 FORWARD LENGTH=396 ... 135 3e-36
AT3G12970.1 | serine/arginine repetitive matrix-like protein | C... 121 3e-31
>AT1G56020.1 | serine/arginine repetitive matrix-like protein |
Chr1:20952216-20953412 FORWARD LENGTH=398 | 201606
Length = 398
Score = 145 bits (366), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/287 (45%), Positives = 167/287 (58%), Gaps = 53/287 (18%)
Query: 20 PETAKAYRRGFISDSELYLFSPKAPRCSSRWKELLGLKKLQNSRNNDLHQMNSSSTSSKN 79
PE K+ RR + S+L FSPKAPRC++RW+ELLGLK+L N++ + SSS+SS N
Sbjct: 109 PEVLKSCRRLEMEISDL--FSPKAPRCTTRWRELLGLKRLVNAKEQEESIKASSSSSSTN 166
Query: 80 LNSSSLTERFRFRHPKSSSSSLVDSSLNLPLLKDSDSEIVVPNSSGSSSLSSSSSISSSS 139
+SS + F H S SS+ S PL K+SD +S S S++SS
Sbjct: 167 PKTSSFKQ---FLHRGSKSSTAASS----PLQKESD-------------ISESISVASSR 206
Query: 140 SSSSSSLSVPN-LEEQSRFSLDLD--------PKLMSQINLNRNPPRARLAKSRQGGGGS 190
S SSS S + +++ R SLDLD P NLN+ PR RLAK R+ S
Sbjct: 207 LSLSSSSSSSHEIDDLPRLSLDLDKPSANPFAPSRTHSRNLNQ--PRIRLAKPRRNHPPS 264
Query: 191 NE--NGRVARSSMHRVPESNPIPAIGLTI--DSPRMNSSGKIVFQSLERSSSSPSTFNGG 246
+G + S+ I + GLT+ DSPR+N+SGKIVF LERSSSSP +F GG
Sbjct: 265 TPSVDGSSSSSAC--------IESRGLTVTADSPRLNASGKIVFHGLERSSSSPGSFTGG 316
Query: 247 PRLK-HRGVERSYSANVVRVTPVLNVPVCSLRGSSKSGSVFGFGQLF 292
PR+K H G+ RSYSAN VR+TPVLNVPVCSL KSG FGQLF
Sbjct: 317 PRMKQHHGMPRSYSAN-VRITPVLNVPVCSL----KSG--LFFGQLF 356
>AT1G79060.1 | TPRXL | Chr1:29741873-29743063 FORWARD LENGTH=396 |
201606
Length = 396
Score = 135 bits (339), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 135/273 (49%), Positives = 165/273 (60%), Gaps = 44/273 (16%)
Query: 39 FSPKAPRCSSRWKELLGLKKLQNSRNNDLHQMNSSSTSSKNLNSSSLTERFRFRHPKSSS 98
FSPKAPRCSSRW++LLGLK+ S+N+ +++T++ +S+S ++F R +SSS
Sbjct: 113 FSPKAPRCSSRWRDLLGLKRF--SQNSSKSASTATTTTTNPRSSTSSLKQFLHRSSRSSS 170
Query: 99 SSLVDSSLNL-PLLKDSDSEIVVPNSSGSSSLSSSSSISSSSSSSSSSLSVPNLEEQSRF 157
SS S L PLLKDSDS S SISSS S SSS S + E+ R
Sbjct: 171 SSSDASLLMSLPLLKDSDS--------------ESVSISSSRMSLSSSSSGHDHEDLPRL 216
Query: 158 SLDLD-PKLMSQINLNRN---------------PPRARLAKSRQGGGGSNENGRVARSSM 201
SLD + P INLN N PPR RL G G GRV RS M
Sbjct: 217 SLDAERPNQNHIINLNHNLTANPFAPARSLNPNPPRMRLVNHSTSGTGG---GRVGRSPM 273
Query: 202 HR-VPESNPIPAIGLTIDSPRMNSSGKIVFQSLERSSSSPSTFNGGPR-LKHRGVERSYS 259
R E++ I G+++DSPR+NSSGKIVFQ+LERSSSSPS+FNGG +HRG+ERSYS
Sbjct: 274 RRSGGETSAIMNRGVSVDSPRLNSSGKIVFQNLERSSSSPSSFNGGTSGYRHRGMERSYS 333
Query: 260 ANVVRVTPVLNVPVCSLRGSSKSGSVFGFGQLF 292
+N VRVTPVLNVPVCS+RG GSV FGQ F
Sbjct: 334 SN-VRVTPVLNVPVCSIRG----GSVV-FGQFF 360
>AT3G12970.1 | serine/arginine repetitive matrix-like protein |
Chr3:4141329-4142474 REVERSE LENGTH=381 | 201606
Length = 381
Score = 121 bits (303), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/263 (42%), Positives = 142/263 (53%), Gaps = 33/263 (12%)
Query: 37 YLFSPKAPRCSSRWKELLGLKKLQNSRNNDLHQMNSSSTSSKNLNSSSLTERFRFRHPKS 96
YLFSP+APRC+ RW+ELLGLK+L ++ SSS+ + + + T FR +S
Sbjct: 107 YLFSPRAPRCTVRWRELLGLKRLAKTQQE---ASASSSSRLSSSSPNPKTASFRHFLNRS 163
Query: 97 SSSSLVDSSLNLPLLKDSDSEIVVPNSSGSSSLSSSSSISSSSSSSSSSLSVPNLEEQSR 156
S S+ S P DS+I+ +S+ SS S S SSSS L++ R
Sbjct: 164 SKSTAQQPSHPPP---GKDSDILESSSTSISSSRLSLSSSSSSGH--------ELDDLPR 212
Query: 157 FSLDLDPKLMSQINLNRNPPRARLAKSRQGGGGSNENGRVARSSMH--RVPESNPIP--- 211
SLDLD K + NP A+SR N R +V ES
Sbjct: 213 LSLDLDNKPGTP-----NP----FARSRAHHHHHLRNQNQPRKPRRHTQVDESTESSIES 263
Query: 212 -AIGLTIDSPRMNSSGKIVFQSLERSSSSPSTFNGGPRLK-HRGVERSYSANVVRVTPVL 269
+ +T DSPR+N+SGKIVF LERSSSSP F GGPR+K H G+ RS+SAN VR+TPVL
Sbjct: 264 RVMTVTADSPRLNASGKIVFHGLERSSSSPGNFTGGPRMKLHHGMPRSHSAN-VRITPVL 322
Query: 270 NVPVCSLRGSSKSGSVFGFGQLF 292
NVPV SLR KSG FGQLF
Sbjct: 323 NVPVSSLRSGPKSG--LFFGQLF 343