BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1820.1
(104 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 62 8e-13
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 54 2e-09
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 54 2e-09
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 45 4e-07
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 62.4 bits (150), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 8 NPLFYKSILGGLQYATMTTPDIAYVANNLFQFVHQPRTVHLVLLKKVLRYLKGTLGAGIL 67
+P ++SI+G LQY T+T PDI+Y N + Q +H+P LLK+VLRY+KGT+ G+
Sbjct: 96 DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155
Query: 68 IQ 69
I
Sbjct: 156 IH 157
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 53.9 bits (128), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 3 GDLIDNPLFYKSILGGLQYATMTTPDIAYVANNLFQFVHQPRTVHLVLLKKVLRYLKGTL 62
GD +D Y+ ++G L Y +T DI++ N L QF PR H + K+L Y+KGT+
Sbjct: 370 GDFVDAKA-YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTV 428
Query: 63 GAGIL 67
G G+
Sbjct: 429 GQGLF 433
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 53.9 bits (128), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 3 GDLIDNPLFYKSILGGLQYATMTTPDIAYVANNLFQFVHQPRTVHLVLLKKVLRYLKGTL 62
GD +D Y+ ++G L Y +T DI++ N L QF PR H + K+L Y+KGT+
Sbjct: 370 GDFVDAKA-YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTV 428
Query: 63 GAGIL 67
G G+
Sbjct: 429 GQGLF 433
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 45.4 bits (106), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 21 YATMTTPDIAYVANNLFQFVHQPRTVHLVLLKKVLRYLKGTLGAGILIQPGDVCVLSCF 79
Y T+T PD+ + N L QF RT + + KVL Y+KGT+G G+ L F
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60