BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1830.1
(409 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 160 2e-42
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 160 2e-42
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 106 6e-27
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 160 bits (404), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 100/142 (70%)
Query: 229 SYVSTLASFSEPKSYKEAAKHKHWCKAMQDEYEALIHNNTWSLTLRIPSMNVLGCKWVFK 288
S++ +A EP +Y EA + WC AM DE A+ +TW + P+ +GCKWV+K
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 289 VKQKSDGTLERYNTRLVSQGYNQQEGIDYQKTFYPVVKITTVRVVLTLTITNQWPIHQLD 348
+K SDGT+ERY RLV++GY QQEGID+ +TF PV K+T+V+++L ++ + +HQLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 349 VSNAFLHGDLYEDVYMKQPPGF 370
+SNAFL+GDL E++YMK PPG+
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGY 216
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 160 bits (404), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 100/142 (70%)
Query: 229 SYVSTLASFSEPKSYKEAAKHKHWCKAMQDEYEALIHNNTWSLTLRIPSMNVLGCKWVFK 288
S++ +A EP +Y EA + WC AM DE A+ +TW + P+ +GCKWV+K
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 289 VKQKSDGTLERYNTRLVSQGYNQQEGIDYQKTFYPVVKITTVRVVLTLTITNQWPIHQLD 348
+K SDGT+ERY RLV++GY QQEGID+ +TF PV K+T+V+++L ++ + +HQLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 349 VSNAFLHGDLYEDVYMKQPPGF 370
+SNAFL+GDL E++YMK PPG+
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGY 216
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 106 bits (264), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 87/157 (55%), Gaps = 25/157 (15%)
Query: 199 MQTRLKSGISKPKTIPDHIAHLSVPHALDKSYVSTLASF--SEPKSYKEAAKHKHWCKAM 256
M TR K+GI+K L+ Y T+ + EPKS A K WC+AM
Sbjct: 1 MLTRSKAGINK----------------LNPKYSLTITTTIKKEPKSVIFALKDPGWCQAM 44
Query: 257 QDEYEALIHNNTWSLTLRIPSMNVLGCKWVFKVKQKSDGTLERYNTRLVSQGYNQQEGID 316
Q+E +AL N TW L + N+LGCKWVFK K SDGTL+R RLV++G++Q+EGI
Sbjct: 45 QEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIY 104
Query: 317 YQKTFYPVVKITTVRVVLTLTITNQWPIHQLDVSNAF 353
+ +T+ PVV+ T+R +L + QL+V +
Sbjct: 105 FVETYSPVVRTATIRTILNVA-------QQLEVGQSI 134