BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1890.1
(164 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42905.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 43 3e-05
>AT5G42905.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:17201414-17202323 REVERSE
LENGTH=258 | 201606
Length = 258
Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 19 GNPGVSGCGGIFRNNRGFVLGCFAIPLGIQNSVYSELMPVVHAVKMAWTRSWKKIWLECD 78
GNPG++ GG+ R+ G G F++ +G ++ ++EL V + + AW + ++ LE D
Sbjct: 158 GNPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELWGVYYGLYFAWEKKVPRVELEVD 217
Query: 79 SMLVLQALNN 88
S ++ L
Sbjct: 218 SEAIVGFLKT 227