BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1940.1
(438 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 133 4e-33
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 133 4e-33
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 105 1e-25
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 81 8e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 133 bits (334), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 134/257 (52%), Gaps = 11/257 (4%)
Query: 128 ISRLKKELNKYFDMKDLGPAKQILGMHISRDRKAGKLWLSQERYIEMVLERFNMDKTKPV 187
+ LK +L F ++DLGP K LG+ I+R A + + Q +Y +L+ + KP
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIARS--AAGINICQRKYALDLLDETGLLGCKPS 354
Query: 188 SCPLASHFKLTRDQCPSTRSEKEEMEKIPYASAVGSLMYAMVCTRPDIAFAVGVVSRFLA 247
S P+ S S + ++ Y +G LMY + TR DI+FAV +S+F
Sbjct: 355 SVPMDPSVTF------SAHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
Query: 248 NPGKEHWLAVKWILKYLRGTSKARICFGNDKPI-LVGYTDADMAGDVDSKRSTSGYLFTF 306
P H AV IL Y++GT + + + + L ++DA D++RST+GY
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 307 SGGAVSWQSKLQKCVALSTIEAEYIAITECCKEILWMKRLLEELGMKQDN-YVIHCDSQS 365
+SW+SK Q+ V+ S+ EAEY A++ E++W+ + EL + ++ CD+ +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 366 AIHFSKNSSFHSKSKHI 382
AIH + N+ FH ++KHI
Sbjct: 528 AIHIATNAVFHERTKHI 544
Score = 130 bits (328), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 90/135 (66%)
Query: 1 MQDEIESLHKNNTFKLVEKPKNKKILKNKWVFKIKTEERNSQPRYKARLVVKGFGQKKGI 60
M DEI ++ +T+++ P NKK + KWV+KIK + RYKARLV KG+ Q++GI
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DFDEIFSPMVKMSSIRLVLGLAASMNLEIEQLDVKTAFLHGDLEEDVYMEQPTGFEVKGK 120
DF E FSP+ K++S++L+L ++A N + QLD+ AFL+GDL+E++YM+ P G+ +
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 121 EHLDANKISRLKKEL 135
+ L N + LKK +
Sbjct: 222 DSLPPNAVCYLKKSI 236
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 133 bits (334), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 134/257 (52%), Gaps = 11/257 (4%)
Query: 128 ISRLKKELNKYFDMKDLGPAKQILGMHISRDRKAGKLWLSQERYIEMVLERFNMDKTKPV 187
+ LK +L F ++DLGP K LG+ I+R A + + Q +Y +L+ + KP
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIARS--AAGINICQRKYALDLLDETGLLGCKPS 354
Query: 188 SCPLASHFKLTRDQCPSTRSEKEEMEKIPYASAVGSLMYAMVCTRPDIAFAVGVVSRFLA 247
S P+ S S + ++ Y +G LMY + TR DI+FAV +S+F
Sbjct: 355 SVPMDPSVTF------SAHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
Query: 248 NPGKEHWLAVKWILKYLRGTSKARICFGNDKPI-LVGYTDADMAGDVDSKRSTSGYLFTF 306
P H AV IL Y++GT + + + + L ++DA D++RST+GY
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 307 SGGAVSWQSKLQKCVALSTIEAEYIAITECCKEILWMKRLLEELGMKQDN-YVIHCDSQS 365
+SW+SK Q+ V+ S+ EAEY A++ E++W+ + EL + ++ CD+ +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 366 AIHFSKNSSFHSKSKHI 382
AIH + N+ FH ++KHI
Sbjct: 528 AIHIATNAVFHERTKHI 544
Score = 130 bits (328), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 90/135 (66%)
Query: 1 MQDEIESLHKNNTFKLVEKPKNKKILKNKWVFKIKTEERNSQPRYKARLVVKGFGQKKGI 60
M DEI ++ +T+++ P NKK + KWV+KIK + RYKARLV KG+ Q++GI
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DFDEIFSPMVKMSSIRLVLGLAASMNLEIEQLDVKTAFLHGDLEEDVYMEQPTGFEVKGK 120
DF E FSP+ K++S++L+L ++A N + QLD+ AFL+GDL+E++YM+ P G+ +
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 121 EHLDANKISRLKKEL 135
+ L N + LKK +
Sbjct: 222 DSLPPNAVCYLKKSI 236
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 105 bits (261), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 11/210 (5%)
Query: 134 ELNKYFDMKDLGPAKQILGMHISRDRKAGKLWLSQERYIEMVLERFNMDKTKPVSCPLAS 193
+L+ F MKDLGP LG+ I + +G L+LSQ +Y E +L M KP+S PL
Sbjct: 26 QLSSTFSMKDLGPVHYFLGIQI-KTHPSG-LFLSQTKYAEQILNNAGMLDCKPMSTPLP- 82
Query: 194 HFKLTRDQCPSTRSEKEEMEKIPYASAVGSLMYAMVCTRPDIAFAVGVVSRFLANPGKEH 253
KL S+ S + + + S VG+L Y + TRPDI++AV +V + + P
Sbjct: 83 -LKLN-----SSVSTAKYPDPSDFRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLAD 135
Query: 254 WLAVKWILKYLRGT-SKARICFGNDKPILVGYTDADMAGDVDSKRSTSGYLFTFSGGAVS 312
+ +K +L+Y++GT N K + + D+D AG ++RST+G+ +S
Sbjct: 136 FDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIIS 195
Query: 313 WQSKLQKCVALSTIEAEYIAITECCKEILW 342
W +K Q V+ S+ E EY A+ E+ W
Sbjct: 196 WSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 81.3 bits (199), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Query: 1 MQDEIESLHKNNTFKLVEKPKNKKILKNKWVFKIKTEERNSQPRYKARLVVKGFGQKKGI 60
MQ+E+++L +N T+ LV P N+ IL KWVFK K + R KARLV KGF Q++GI
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103
Query: 61 DFDEIFSPMVKMSSIRLVLGLAASMNLEIEQ 91
F E +SP+V+ ++IR +L +A LE+ Q
Sbjct: 104 YFVETYSPVVRTATIRTILNVAQ--QLEVGQ 132