BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2000.1
(1047 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 254 3e-70
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 254 3e-70
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 159 1e-43
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 121 2e-31
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 59 4e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 254 bits (650), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/412 (35%), Positives = 215/412 (52%), Gaps = 72/412 (17%)
Query: 705 HKPNYIPDFVAH---------------YTICHPISSAFVALLHEFHEPTSFKEASKSPQW 749
KP Y+ D+ H Y P+ +F+ + + EP+++ EA + W
Sbjct: 39 RKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVW 98
Query: 750 VKAMQDEFSALERNNTWTLVPYEQSMNVLGCKWVYKVKQKSDGSLERYKARLVAKGYHQQ 809
AM DE A+E +TW + + +GCKWVYK+K SDG++ERYKARLVAKGY QQ
Sbjct: 99 CGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQ 158
Query: 810 DRIDYNEIFSPVVKPTTIRLILTIAVTKAWVIRQLDVSNAFLHGVLDEKVYMSQPSGFTS 869
+ ID+ E FSPV K T+++LIL I+ + + QLD+SNAFL+G LDE++YM P G+ +
Sbjct: 159 EGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAA 218
Query: 870 SE------------KKS------------------------------HVLLL-------- 879
+ KKS H L
Sbjct: 219 RQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFL 278
Query: 880 ----YVDDIILTGSSLPMISSLIKTLSSEFAIKDLGSLHYFLGIEVTRNGSDSLLLTQKK 935
YVDDII+ ++ + L L S F ++DLG L YFLG+E+ R+ + + + Q+K
Sbjct: 279 CVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA-GINICQRK 337
Query: 936 YTLQILEKNDMLDCKPSKTPV-PSTSRVSKLDGDIISDPSTYRSTVGALQYLTLTSPDIS 994
Y L +L++ +L CKPS P+ PS + + GD + D YR +G L YL +T DIS
Sbjct: 338 YALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFV-DAKAYRRLIGRLMYLQITRLDIS 396
Query: 995 FAVNYTAQFMQEPRTSHFSIVKKILRYLKGSIGSCITINPGSLSSLKTYSDS 1046
FAVN +QF + PR +H V KIL Y+KG++G + + + L+ +SD+
Sbjct: 397 FAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 254 bits (650), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/412 (35%), Positives = 215/412 (52%), Gaps = 72/412 (17%)
Query: 705 HKPNYIPDFVAH---------------YTICHPISSAFVALLHEFHEPTSFKEASKSPQW 749
KP Y+ D+ H Y P+ +F+ + + EP+++ EA + W
Sbjct: 39 RKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVW 98
Query: 750 VKAMQDEFSALERNNTWTLVPYEQSMNVLGCKWVYKVKQKSDGSLERYKARLVAKGYHQQ 809
AM DE A+E +TW + + +GCKWVYK+K SDG++ERYKARLVAKGY QQ
Sbjct: 99 CGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQ 158
Query: 810 DRIDYNEIFSPVVKPTTIRLILTIAVTKAWVIRQLDVSNAFLHGVLDEKVYMSQPSGFTS 869
+ ID+ E FSPV K T+++LIL I+ + + QLD+SNAFL+G LDE++YM P G+ +
Sbjct: 159 EGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAA 218
Query: 870 SE------------KKS------------------------------HVLLL-------- 879
+ KKS H L
Sbjct: 219 RQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFL 278
Query: 880 ----YVDDIILTGSSLPMISSLIKTLSSEFAIKDLGSLHYFLGIEVTRNGSDSLLLTQKK 935
YVDDII+ ++ + L L S F ++DLG L YFLG+E+ R+ + + + Q+K
Sbjct: 279 CVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA-GINICQRK 337
Query: 936 YTLQILEKNDMLDCKPSKTPV-PSTSRVSKLDGDIISDPSTYRSTVGALQYLTLTSPDIS 994
Y L +L++ +L CKPS P+ PS + + GD + D YR +G L YL +T DIS
Sbjct: 338 YALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFV-DAKAYRRLIGRLMYLQITRLDIS 396
Query: 995 FAVNYTAQFMQEPRTSHFSIVKKILRYLKGSIGSCITINPGSLSSLKTYSDS 1046
FAVN +QF + PR +H V KIL Y+KG++G + + + L+ +SD+
Sbjct: 397 FAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 159 bits (402), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 118/175 (67%), Gaps = 10/175 (5%)
Query: 877 LLLYVDDIILTGSSLPMISSLIKTLSSEFAIKDLGSLHYFLGIEVTRNGSDSLLLTQKKY 936
LLLYVDDI+LTGSS +++ LI LSS F++KDLG +HYFLGI++ + S L L+Q KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPS-GLFLSQTKY 61
Query: 937 TLQILEKNDMLDCKPSKTPVPSTSRVSKLDGDIIS----DPSTYRSTVGALQYLTLTSPD 992
QIL MLDCKP TP+P KL+ + + DPS +RS VGALQYLTLT PD
Sbjct: 62 AEQILNNAGMLDCKPMSTPLPL-----KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPD 116
Query: 993 ISFAVNYTAQFMQEPRTSHFSIVKKILRYLKGSIGSCITINPGSLSSLKTYSDSD 1047
IS+AVN Q M EP + F ++K++LRY+KG+I + I+ S +++ + DSD
Sbjct: 117 ISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 121 bits (304), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 85/139 (61%), Gaps = 14/139 (10%)
Query: 696 MTTRLQSGIHKPNYIPDFVAHYTICHPISSAFVALLHEFHEPTSFKEASKSPQWVKAMQD 755
M TR ++GI+K N P + TI I EP S A K P W +AMQ+
Sbjct: 1 MLTRSKAGINKLN--PKY--SLTITTTIKK----------EPKSVIFALKDPGWCQAMQE 46
Query: 756 EFSALERNNTWTLVPYEQSMNVLGCKWVYKVKQKSDGSLERYKARLVAKGYHQQDRIDYN 815
E AL RN TW LVP + N+LGCKWV+K K SDG+L+R KARLVAKG+HQ++ I +
Sbjct: 47 ELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFV 106
Query: 816 EIFSPVVKPTTIRLILTIA 834
E +SPVV+ TIR IL +A
Sbjct: 107 ETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 58.9 bits (141), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 985 YLTLTSPDISFAVNYTAQFMQEPRTSHFSIVKKILRYLKGSIGSCITINPGSLSSLKTYS 1044
YLT+T PD++FAVN +QF RT+ V K+L Y+KG++G + + S LK ++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 1045 DSD 1047
DSD
Sbjct: 62 DSD 64