BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2060.1
(374 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 139 6e-36
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 139 6e-36
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 101 1e-24
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 58 2e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 139 bits (351), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 173/378 (45%), Gaps = 35/378 (9%)
Query: 2 WYNRLGEYLTKEGYVNNHICPCVFIKKSYTGFAIIAIYVDDINLIGTVED--VSKAAEYL 59
W+ + L G+V +H F+K + T F + +YVDDI +I + D V + L
Sbjct: 246 WFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDI-IICSNNDAAVDELKSQL 304
Query: 60 KKEFEMKDLGKTKFCIGLQIERSTNGILVHQNLYTEKVLKRFRMDTAYPLTTPM---VVR 116
K F+++DLG K+ +GL+I RS GI + Q Y +L + P + PM V
Sbjct: 305 KSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTF 364
Query: 117 SLDTIKDPYRPKEDNEVLLGPEVLYLSAIGALLYLAQCTRPDISFAVNLLVRFSSAPTKR 176
S + D K Y IG L+YL Q TR DISFAVN L +FS AP
Sbjct: 365 SAHSGGDFVDAKA-----------YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLA 412
Query: 177 HWMGVKHILRYLRGTTDMGLFYSKNSSDGSQVAGYTDAGYLSNPYKGVSQTGYVFTSGGT 236
H V IL Y++GT GLFYS + QV ++DA + S S GY G +
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV--FSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 237 AFFWRSSKQSMPATFSSHSEIIALHEATRECVWLRSIISHIRISCKLPEITKSPTIIYED 296
W+S KQ + + S+ +E AL AT E +WL + +LP PT+++ D
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFREL----QLP--LSKPTLLFCD 524
Query: 297 NADCIAQIKEGYIKGDRTKHISPKLFFSHHVQKNGEIDIQKIQSFENY--ADLFTKSLPT 354
N I I + +RTKHI H V++ SF+ Y D FT+ L
Sbjct: 525 NTAAI-HIATNAVFHERTKHIESDC---HSVRERSVYQATLSYSFQAYDEQDGFTEYLSP 580
Query: 355 I---TFRKLVEGIGMRSL 369
I T +V G+ L
Sbjct: 581 ILRGTIMYIVSMFGLAGL 598
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 139 bits (351), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 173/378 (45%), Gaps = 35/378 (9%)
Query: 2 WYNRLGEYLTKEGYVNNHICPCVFIKKSYTGFAIIAIYVDDINLIGTVED--VSKAAEYL 59
W+ + L G+V +H F+K + T F + +YVDDI +I + D V + L
Sbjct: 246 WFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDI-IICSNNDAAVDELKSQL 304
Query: 60 KKEFEMKDLGKTKFCIGLQIERSTNGILVHQNLYTEKVLKRFRMDTAYPLTTPM---VVR 116
K F+++DLG K+ +GL+I RS GI + Q Y +L + P + PM V
Sbjct: 305 KSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTF 364
Query: 117 SLDTIKDPYRPKEDNEVLLGPEVLYLSAIGALLYLAQCTRPDISFAVNLLVRFSSAPTKR 176
S + D K Y IG L+YL Q TR DISFAVN L +FS AP
Sbjct: 365 SAHSGGDFVDAKA-----------YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLA 412
Query: 177 HWMGVKHILRYLRGTTDMGLFYSKNSSDGSQVAGYTDAGYLSNPYKGVSQTGYVFTSGGT 236
H V IL Y++GT GLFYS + QV ++DA + S S GY G +
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV--FSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 237 AFFWRSSKQSMPATFSSHSEIIALHEATRECVWLRSIISHIRISCKLPEITKSPTIIYED 296
W+S KQ + + S+ +E AL AT E +WL + +LP PT+++ D
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFREL----QLP--LSKPTLLFCD 524
Query: 297 NADCIAQIKEGYIKGDRTKHISPKLFFSHHVQKNGEIDIQKIQSFENY--ADLFTKSLPT 354
N I I + +RTKHI H V++ SF+ Y D FT+ L
Sbjct: 525 NTAAI-HIATNAVFHERTKHIESDC---HSVRERSVYQATLSYSFQAYDEQDGFTEYLSP 580
Query: 355 I---TFRKLVEGIGMRSL 369
I T +V G+ L
Sbjct: 581 ILRGTIMYIVSMFGLAGL 598
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 101 bits (251), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 112/235 (47%), Gaps = 13/235 (5%)
Query: 36 IAIYVDDINLIGTVEDVSKAAEY-LKKEFEMKDLGKTKFCIGLQIERSTNGILVHQNLYT 94
+ +YVDDI L G+ + + L F MKDLG + +G+QI+ +G+ + Q Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 95 EKVLKRFRMDTAYPLTTPMVVRSLDTIKDPYRPKEDNEVLLGPEVLYLSAIGALLYLAQC 154
E++L M P++TP+ ++ ++ P + + S +GAL YL
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSD---------FRSIVGALQYLT-L 112
Query: 155 TRPDISFAVNLLVRFSSAPTKRHWMGVKHILRYLRGTTDMGLFYSKNSSDGSQVAGYTDA 214
TRPDIS+AVN++ + PT + +K +LRY++GT GL+ KNS V + D+
Sbjct: 113 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSK--LNVQAFCDS 170
Query: 215 GYLSNPYKGVSQTGYVFTSGGTAFFWRSSKQSMPATFSSHSEIIALHEATRECVW 269
+ S TG+ G W + +Q + S+ +E AL E W
Sbjct: 171 DWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 58.2 bits (139), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 149 LYLAQCTRPDISFAVNLLVRFSSAPTKRHWMGVKHILRYLRGTTDMGLFYSKNSSDGSQV 208
+YL TRPD++FAVN L +FSSA V +L Y++GT GLFYS S Q+
Sbjct: 1 MYLT-ITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSD--LQL 57
Query: 209 AGYTDAGYLSNPYKGVSQTGY 229
+ D+ + S P S TG+
Sbjct: 58 KAFADSDWASCPDTRRSVTGF 78