BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2070.1
(126 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G47680.1 | DNA binding protein | Chr3:17577483-17578391 REVER... 65 3e-13
AT5G41220.2 | glutathione S-transferase THETA 3 | Chr5:16494560-... 58 2e-10
AT5G41220.3 | glutathione S-transferase THETA 3 | Chr5:16494560-... 57 2e-10
AT5G41220.1 | glutathione S-transferase THETA 3 | Chr5:16494560-... 57 2e-10
AT1G66235.1 | no-apical-meristem-associated carboxy-terminal dom... 55 1e-09
>AT3G47680.1 | DNA binding protein | Chr3:17577483-17578391 REVERSE
LENGTH=302 | 201606
Length = 302
Score = 65.1 bits (157), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 32 KRYTHVDDNVLVNAYLHIITDAIIGNDQRAGTFWNKIVEHFNERTNQN----RAPKGLKC 87
++++ +D VLV+A+L+ DA+IGN+Q+ FW++I ++ N R +K
Sbjct: 48 RKWSAGEDLVLVSAWLNTSKDAVIGNEQKGYAFWSRIAAYYGASPKLNGVEKRETGHIKQ 107
Query: 88 RWSEINKQCAKFYGHLSFLQRNPKSGENDDDRV 120
RW++IN+ KF G + SG+NDDD V
Sbjct: 108 RWTKINEGVGKFVGSYEAATKQKSSGQNDDDVV 140
>AT5G41220.2 | glutathione S-transferase THETA 3 |
Chr5:16494560-16496623 REVERSE LENGTH=540 | 201606
Length = 540
Score = 57.8 bits (138), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 24 TLDSSVAPKRYTHVDDNVLVNAYLHIITDAIIGNDQRAGTFWNKIVEHFNERTN----QN 79
T D ++++ +D +L++A+L+ D I+ N+ +A FW +I +FN +
Sbjct: 213 TTDRRKHRRKWSRAEDAILISAWLNTSKDPIVDNEHKACAFWKRIGAYFNNSASLANLPK 272
Query: 80 RAPKGLKCRWSEINKQCAKFYGHLSFLQRNPKSGENDDD 118
R P K RWS++N + KF G SG+++DD
Sbjct: 273 REPSHCKQRWSKLNDKVCKFVGCYDQALNQRSSGQSEDD 311
>AT5G41220.3 | glutathione S-transferase THETA 3 |
Chr5:16494560-16496525 REVERSE LENGTH=532 | 201606
Length = 532
Score = 57.4 bits (137), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 32 KRYTHVDDNVLVNAYLHIITDAIIGNDQRAGTFWNKIVEHFNERTN----QNRAPKGLKC 87
++++ +D +L++A+L+ D I+ N+ +A FW +I +FN + R P K
Sbjct: 213 RKWSRAEDAILISAWLNTSKDPIVDNEHKACAFWKRIGAYFNNSASLANLPKREPSHCKQ 272
Query: 88 RWSEINKQCAKFYGHLSFLQRNPKSGENDDD 118
RWS++N + KF G SG+++DD
Sbjct: 273 RWSKLNDKVCKFVGCYDQALNQRSSGQSEDD 303
>AT5G41220.1 | glutathione S-transferase THETA 3 |
Chr5:16494560-16496969 REVERSE LENGTH=590 | 201606
Length = 590
Score = 57.4 bits (137), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 32 KRYTHVDDNVLVNAYLHIITDAIIGNDQRAGTFWNKIVEHFNERTN----QNRAPKGLKC 87
++++ +D +L++A+L+ D I+ N+ +A FW +I +FN + R P K
Sbjct: 271 RKWSRAEDAILISAWLNTSKDPIVDNEHKACAFWKRIGAYFNNSASLANLPKREPSHCKQ 330
Query: 88 RWSEINKQCAKFYGHLSFLQRNPKSGENDDD 118
RWS++N + KF G SG+++DD
Sbjct: 331 RWSKLNDKVCKFVGCYDQALNQRSSGQSEDD 361
>AT1G66235.1 | no-apical-meristem-associated carboxy-terminal domain
protein | Chr1:24683006-24683931 REVERSE LENGTH=284 |
201606
Length = 284
Score = 55.1 bits (131), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 34 YTHVDDNVLVNAYLHIITDAIIGNDQRAGTFWNKIVEHFNERTN---QNRAPKGLKCRWS 90
Y++ +D L Y+ I D IIG Q + FW+++ E F R N R+ K L+CR
Sbjct: 7 YSNEEDKFLCQVYMDISQDPIIGVYQSSDHFWDRVAESFENRKNPTWSKRSKKSLQCRLQ 66
Query: 91 EINKQCAKFYGHLSFLQRNPKSGENDDD 118
I K K + + + SG + DD
Sbjct: 67 TIEKASKKLHACIKLCENRRSSGASSDD 94