BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2090.1
(372 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G36320.1 | hypothetical protein | Chr1:13671876-13673939 FORW... 458 e-161
AT4G37920.1 | endoribonuclease E-like protein | Chr4:17828538-17... 260 2e-83
>AT1G36320.1 | hypothetical protein | Chr1:13671876-13673939 FORWARD
LENGTH=414 | 201606
Length = 414
Score = 458 bits (1178), Expect = e-161, Method: Compositional matrix adjust.
Identities = 219/309 (70%), Positives = 260/309 (84%), Gaps = 7/309 (2%)
Query: 35 ERLIIRNQPHDKVIHEESAEIDRETSEEEQDTKCTDDHKMVKVSDKLIEVFMVDKPTPTD 94
+R +I DK + + +E ++ + D+ +M+KV DKLIEVFMVDKPTP+D
Sbjct: 60 QRFVISAVVDDKSV------VAKEEKKDGSEEVVVDNQRMIKVCDKLIEVFMVDKPTPSD 113
Query: 95 WRRLLAFSKEWSNIRPHFFNRCQTRADSEADPGLKHRLLRLGRKLKEIDEDVQRHNELLE 154
WRRLLAFSKEW +IRPHF+ RCQ RADSE +P +KH++ RL RKLKE+DED+QRHNELL
Sbjct: 114 WRRLLAFSKEWDSIRPHFYKRCQERADSEDNPEMKHKVHRLARKLKEVDEDIQRHNELLN 173
Query: 155 VIQ-GAQSEIGDIVAKRRKDFTKEFFVHLHTVAESYHDNPEEQAALAKLGTMSLAAVQAY 213
VI+ +EIG++VA+RRKDFT EFF HLHTVAESY+DNP+EQ ALA LG +S+AAVQAY
Sbjct: 174 VIKRTPPAEIGELVARRRKDFTNEFFEHLHTVAESYYDNPDEQNALASLGKLSIAAVQAY 233
Query: 214 DTASESIEALNAAELKFQDIISSPSLDAACKKIDNLAEKNQLDSALVLMITKAWSAAKDS 273
DT++ESI+ALNAAE+K QDII+SPSLDAAC+KID+LAEKNQLDSALVLMITKAWSAAK+S
Sbjct: 234 DTSTESIDALNAAEMKLQDIINSPSLDAACRKIDSLAEKNQLDSALVLMITKAWSAAKES 293
Query: 274 NMTKDEVKDTLFHLYKTARGNLQRLMPKEIRILKYLLMIEDPQQQISGLNDAFTPGDELE 333
NM K+EVKD L+HLY TARGNLQRLMPKE+RILKYLL IEDPQ+QIS L DAFTPGDELE
Sbjct: 294 NMMKEEVKDILYHLYVTARGNLQRLMPKEVRILKYLLSIEDPQEQISALQDAFTPGDELE 353
Query: 334 GTDVDCLYT 342
GTDVD LYT
Sbjct: 354 GTDVDYLYT 362
>AT4G37920.1 | endoribonuclease E-like protein |
Chr4:17828538-17830317 REVERSE LENGTH=427 | 201606
Length = 427
Score = 260 bits (665), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 201/291 (69%), Gaps = 2/291 (0%)
Query: 52 SAEIDRETSEEEQDTKCTDDHKMVKVSDKLIEVFMVDKPTPTDWRRLLAFSKEWSNIRPH 111
SAE+ + + E+ + + + + M + DK+I++F+ +KP W+ L EW+ +
Sbjct: 62 SAEV-KSSVEDPMEVEVAEGYTMAQFCDKIIDLFLNEKPKVKQWKTYLVLRDEWNKYSVN 120
Query: 112 FFNRCQTRADSEADPGLKHRLLRLGRKLKEIDEDVQRHNELLEVIQGAQSEIGDIVAKRR 171
F+ RC+ RAD+E DP LK +L+ L K+K+ID+++++HN+LL+ IQ ++I I AKRR
Sbjct: 121 FYKRCRIRADTETDPILKQKLVSLESKVKKIDKEMEKHNDLLKEIQENPTDINAIAAKRR 180
Query: 172 KDFTKEFFVHLHTVAESYHDNPEEQAALAKLGTMSLAAVQAYDTASESIEALNAAELKFQ 231
+DFT EFF ++ ++E+ D E++ A+A+L T L+AV AYD ES+E L+ A+ KF+
Sbjct: 181 RDFTGEFFRYVTLLSETL-DGLEDRDAVARLATRCLSAVSAYDNTLESVETLDTAQAKFE 239
Query: 232 DIISSPSLDAACKKIDNLAEKNQLDSALVLMITKAWSAAKDSNMTKDEVKDTLFHLYKTA 291
DI++SPS+D+AC+KI +LA+ +LDS+L+L+I A++AAK+S +E KD ++HLYK
Sbjct: 240 DILNSPSVDSACEKIRSLAKAKELDSSLILLINSAYAAAKESQTVTNEAKDIMYHLYKAT 299
Query: 292 RGNLQRLMPKEIRILKYLLMIEDPQQQISGLNDAFTPGDELEGTDVDCLYT 342
+ +L+ + PKEI++LKYLL I DP+++ S L AF+PGD+ E D LYT
Sbjct: 300 KSSLRSITPKEIKLLKYLLNITDPEERFSALATAFSPGDDHEAKDPKALYT 350