BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2160.1
(327 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G38180.1 | FAR1-related sequence 5 | Chr4:17906702-17909404 R... 55 4e-08
>AT4G38180.1 | FAR1-related sequence 5 | Chr4:17906702-17909404
REVERSE LENGTH=788 | 201606
Length = 788
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 21/206 (10%)
Query: 2 KCGCPFKLRAKCFSEGLWMIEVKNGSHNHTL--PDHLTGHPYVARLSQNKKELVAKLAKS 59
+ GC L K G W++ HNH L PD + ++S K L+ L +
Sbjct: 147 RVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRSHRQISGPAKTLIDTLQAA 206
Query: 60 GIRPKDILWNL------------KQSDDDNYLIMSTIYNEVKRVKRECSEGRSAMQQFYK 107
G+ P+ I+ L + D NY+ N K ++ E ++Q
Sbjct: 207 GMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRN----NRQKSIEGEIQLLLDYLRQMNA 262
Query: 108 SCTDHQYVVKHRCHPNSDEVSDLFFAHPRSVTLALCFPQVLMVDCTYKTNRFKHPLFHVV 167
+ Y V+ V ++F+A P+++ F + D TY++NR++ P
Sbjct: 263 DNPNFFYSVQG---SEDQSVGNVFWADPKAIMDFTHFGDTVTFDTTYRSNRYRLPFAPFT 319
Query: 168 SATSTGKTFTVACAFMCKETSDHYCW 193
G+ CAF+ ET + W
Sbjct: 320 GVNHHGQPILFGCAFIINETEASFVW 345