BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2200.1
(339 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G36228.1 | nucleic acid binding / zinc ion binding protein | ... 48 7e-06
>AT5G36228.1 | nucleic acid binding / zinc ion binding protein |
Chr5:14271691-14272776 FORWARD LENGTH=361 | 201606
Length = 361
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 9/186 (4%)
Query: 65 SQVDGPV---NTFLIKPKS-LFVLNTLNAGRPWILRGRLLVLKQVELPLNEEVDDLFYEP 120
+QV G + F ++ +S + +LN L PW+ + L++ E E D L +
Sbjct: 66 TQVHGRILDDRCFQVRFRSEIDLLNGLRRA-PWVFNEWFIALQRWEDFPTE--DFLTFID 122
Query: 121 MWCTLYKLPLAIQNKEDLDVIFERMGKIIEIKPRSLGFINNKVIKVHFLYDVRTPLLAVI 180
+W + +PL ++ +++I +G+++ + I+V D PL
Sbjct: 123 VWVHIRGIPLPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFR 182
Query: 181 NLLFADRE-CNINISYQKFPGAICQTCRIIEHPLGHCPELAPEPHSNEEDDSSYEPMEDV 239
+ FA RE I Y+K +C C + H + HCP + + + E D P
Sbjct: 183 RVRFASRERAMIGFEYEKLQ-RVCTNCCRVNHQVSHCPYVVHQEEMDNEPDVLVSPERYD 241
Query: 240 EEDPHN 245
+ED N
Sbjct: 242 DEDSLN 247