BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2240.1
(334 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11600.2 | hypothetical protein | Chr5:3733815-3735015 REVERS... 148 1e-42
AT5G11600.1 | hypothetical protein | Chr5:3733815-3735015 REVERS... 148 1e-42
AT1G19990.1 | nucleolin | Chr1:6935327-6936665 FORWARD LENGTH=25... 88 4e-20
>AT5G11600.2 | hypothetical protein | Chr5:3733815-3735015 REVERSE
LENGTH=242 | 201606
Length = 242
Score = 148 bits (373), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 104/151 (68%), Gaps = 12/151 (7%)
Query: 35 IPINK-KKIENSLSTKKIVDLKQKSVTTITKSEVKGKSTTLSSSKTVTKTTGVRVKSVKR 93
+PIN K I + + +V K ++ +T+ S VK K+T S TV+ G + K K+
Sbjct: 67 VPINSVKTIATTSAAASLVKGKAQTTSTVV-SLVKAKTT----SATVSLVKG-KAKREKK 120
Query: 94 VYTLPGQKSDPPEEREPLRIFYESLSKQIPSSEMAEFWMMEHGLLSPEKAKKAFARKQKR 153
VY+L GQK DPPEEREPLRIFYESLSKQIP SEMAEFW+MEHG+LSPEKAK+AF +KQ++
Sbjct: 121 VYSLAGQKFDPPEEREPLRIFYESLSKQIPGSEMAEFWLMEHGMLSPEKAKRAFEKKQRK 180
Query: 154 QQQIRMGIPIKPR-----KPETSQKPQPSKN 179
+QIRMG P K K E+SQ+ SKN
Sbjct: 181 MKQIRMGTPSKSAPTFSSKAESSQRTSASKN 211
>AT5G11600.1 | hypothetical protein | Chr5:3733815-3735015 REVERSE
LENGTH=242 | 201606
Length = 242
Score = 148 bits (373), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 104/151 (68%), Gaps = 12/151 (7%)
Query: 35 IPINK-KKIENSLSTKKIVDLKQKSVTTITKSEVKGKSTTLSSSKTVTKTTGVRVKSVKR 93
+PIN K I + + +V K ++ +T+ S VK K+T S TV+ G + K K+
Sbjct: 67 VPINSVKTIATTSAAASLVKGKAQTTSTVV-SLVKAKTT----SATVSLVKG-KAKREKK 120
Query: 94 VYTLPGQKSDPPEEREPLRIFYESLSKQIPSSEMAEFWMMEHGLLSPEKAKKAFARKQKR 153
VY+L GQK DPPEEREPLRIFYESLSKQIP SEMAEFW+MEHG+LSPEKAK+AF +KQ++
Sbjct: 121 VYSLAGQKFDPPEEREPLRIFYESLSKQIPGSEMAEFWLMEHGMLSPEKAKRAFEKKQRK 180
Query: 154 QQQIRMGIPIKPR-----KPETSQKPQPSKN 179
+QIRMG P K K E+SQ+ SKN
Sbjct: 181 MKQIRMGTPSKSAPTFSSKAESSQRTSASKN 211
>AT1G19990.1 | nucleolin | Chr1:6935327-6936665 FORWARD LENGTH=251 |
201606
Length = 251
Score = 88.2 bits (217), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Query: 95 YTLPGQKSDPPEEREPLRIFYESLSKQIPSSEMAEFWMMEHGLLSPEKAKKAFARKQKRQ 154
Y LPGQK + P+ER+PLRIFYESL KQIP+S+MA+ W+ME GLL EKAKK +K Q
Sbjct: 115 YDLPGQKREQPDERDPLRIFYESLYKQIPTSDMAQIWLMESGLLPAEKAKKVLEKKL--Q 172
Query: 155 QQIRMGIPIK 164
+ ++ P+K
Sbjct: 173 KGGKLSSPVK 182