BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2360.1
(280 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 95 2e-21
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 95 2e-21
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 73 7e-15
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 94.7 bits (234), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 39/268 (14%)
Query: 2 LNSVKEWLWKCFLMKDLGDAEYILGIKIYRDKSRKMIGLSQETYIDKILGRFKMEDSKRG 61
++ +K L CF ++DLG +Y LG++I R S I + Q Y +L + K
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 62 FLPITHDTTVSKTQCPRDPDELAHMKKVPYASAIGSIMYAMVYTRPDVSYALSMCSRYQS 121
+P+ T S D A Y IG +MY + TR D+S+A++ S++
Sbjct: 355 SVPMDPSVTFSAHSGGDFVDAKA------YRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
Query: 122 NPGERHWTAAKNILKYLRRKKDHFL----------------------------SGYVFCL 153
P H A IL Y++ L +GY L
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 154 NGGAVRWKNSKKTTVADSTTEAEYLAALEAAKEGVWMKKFISELGVLSSIKKGVTLYCDN 213
+ WK+ K+ V+ S+ EAEY A A E +W+ +F EL + + K L+CDN
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDN 525
Query: 214 NGAIAHTKEPRAHQKSKYIQRKYHVIRE 241
AI H+++K+I+ H +RE
Sbjct: 526 TAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 94.7 bits (234), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 39/268 (14%)
Query: 2 LNSVKEWLWKCFLMKDLGDAEYILGIKIYRDKSRKMIGLSQETYIDKILGRFKMEDSKRG 61
++ +K L CF ++DLG +Y LG++I R S I + Q Y +L + K
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 62 FLPITHDTTVSKTQCPRDPDELAHMKKVPYASAIGSIMYAMVYTRPDVSYALSMCSRYQS 121
+P+ T S D A Y IG +MY + TR D+S+A++ S++
Sbjct: 355 SVPMDPSVTFSAHSGGDFVDAKA------YRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
Query: 122 NPGERHWTAAKNILKYLRRKKDHFL----------------------------SGYVFCL 153
P H A IL Y++ L +GY L
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 154 NGGAVRWKNSKKTTVADSTTEAEYLAALEAAKEGVWMKKFISELGVLSSIKKGVTLYCDN 213
+ WK+ K+ V+ S+ EAEY A A E +W+ +F EL + + K L+CDN
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDN 525
Query: 214 NGAIAHTKEPRAHQKSKYIQRKYHVIRE 241
AI H+++K+I+ H +RE
Sbjct: 526 TAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 72.8 bits (177), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 1 MLNSVKEWLWKCFLMKDLGDAEYILGIKIYRDKSRKMIGLSQETYIDKILGRFKMEDSK- 59
+LN + L F MKDLG Y LGI+I S + LSQ Y ++IL M D K
Sbjct: 19 LLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTKYAEQILNNAGMLDCKP 76
Query: 60 -RGFLPITHDTTVSKTQCPRDPDELAHMKKVPYASAIGSIMYAMVYTRPDVSYALSMCSR 118
LP+ +++VS + P DP + + S +G++ Y + TRPD+SYA+++ +
Sbjct: 77 MSTPLPLKLNSSVSTAKYP-DPSD--------FRSIVGALQY-LTLTRPDISYAVNIVCQ 126
Query: 119 YQSNPGERHWTAAKNILKYLRRKKDHFL----------------------------SGYV 150
P + K +L+Y++ H L +G+
Sbjct: 127 RMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFC 186
Query: 151 FCLNGGAVRWKNSKKTTVADSTTEAEYLAALEAAKEGVW 189
L + W ++ TV+ S+TE EY A A E W
Sbjct: 187 TFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225