BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2370.1
(226 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 166 5e-47
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 166 5e-47
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 86 1e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 166 bits (421), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 115/183 (62%), Gaps = 7/183 (3%)
Query: 47 ILLVEDNEPSTYEKAMTIPNSEKWLEAMKSEMESMSENQVWNLVDLSDGGEPIGCKWIFK 106
+ + + EPSTY +A W AM E+ +M W + L +PIGCKW++K
Sbjct: 78 VCIAKAKEPSTYNEAKEF---LVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 107 IKTHKDGNVNVFKARLVAKGYRQVQGIEQEETFSPVAILKSIKIILAIAAHYDYEIWQMD 166
IK + DG + +KARLVAKGY Q +GI+ ETFSPV L S+K+ILAI+A Y++ + Q+D
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 167 VKTAFLNGNLEKDVYMTQPEGFE----ESKNSGKVCKLQRSIYGLKQASRSWNLRFHEKI 222
+ AFLNG+L++++YM P G+ +S VC L++SIYGLKQASR W L+F +
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 223 KEF 225
F
Sbjct: 255 IGF 257
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 166 bits (421), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 115/183 (62%), Gaps = 7/183 (3%)
Query: 47 ILLVEDNEPSTYEKAMTIPNSEKWLEAMKSEMESMSENQVWNLVDLSDGGEPIGCKWIFK 106
+ + + EPSTY +A W AM E+ +M W + L +PIGCKW++K
Sbjct: 78 VCIAKAKEPSTYNEAKEF---LVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 107 IKTHKDGNVNVFKARLVAKGYRQVQGIEQEETFSPVAILKSIKIILAIAAHYDYEIWQMD 166
IK + DG + +KARLVAKGY Q +GI+ ETFSPV L S+K+ILAI+A Y++ + Q+D
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 167 VKTAFLNGNLEKDVYMTQPEGFE----ESKNSGKVCKLQRSIYGLKQASRSWNLRFHEKI 222
+ AFLNG+L++++YM P G+ +S VC L++SIYGLKQASR W L+F +
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 223 KEF 225
F
Sbjct: 255 IGF 257
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 85.5 bits (210), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 54 EPSTYEKAMTIPNSEKWLEAMKSEMESMSENQVWNLVDLSDGGEPIGCKWIFKIKTHKDG 113
EP + A+ P W +AM+ E++++S N+ W LV +GCKW+FK K H DG
Sbjct: 27 EPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG 83
Query: 114 NVNVFKARLVAKGYRQVQGIEQEETFSPVAILKSIKIILAIA 155
++ KARLVAKG+ Q +GI ET+SPV +I+ IL +A
Sbjct: 84 TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125