BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2430.1
(391 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 160 8e-43
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 160 8e-43
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 100 1e-24
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 160 bits (405), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 110/161 (68%), Gaps = 7/161 (4%)
Query: 233 EPQTFTEAMATLEAPFWKEAINSEIESIMQNHTWELVDLPSGCKPLGCKWIFKKKLKKDG 292
EP T+ EA L W A++ EI ++ HTWE+ LP KP+GCKW++K K DG
Sbjct: 85 EPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 293 SIDKYKSRLVVKGFRQKEGLDYFDTYSPVSRITSIRVLVAIASLYNLEIHQMDVKTAFLN 352
+I++YK+RLV KG+ Q+EG+D+ +T+SPV ++TS+++++AI+++YN +HQ+D+ AFLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 353 GQLEEEIYMTQPEGFIAPGQE----KKLSRLVKSLYGLKLA 389
G L+EEIYM P G+ A + + L KS+YGLK A
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQA 242
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 160 bits (405), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 110/161 (68%), Gaps = 7/161 (4%)
Query: 233 EPQTFTEAMATLEAPFWKEAINSEIESIMQNHTWELVDLPSGCKPLGCKWIFKKKLKKDG 292
EP T+ EA L W A++ EI ++ HTWE+ LP KP+GCKW++K K DG
Sbjct: 85 EPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 293 SIDKYKSRLVVKGFRQKEGLDYFDTYSPVSRITSIRVLVAIASLYNLEIHQMDVKTAFLN 352
+I++YK+RLV KG+ Q+EG+D+ +T+SPV ++TS+++++AI+++YN +HQ+D+ AFLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 353 GQLEEEIYMTQPEGFIAPGQE----KKLSRLVKSLYGLKLA 389
G L+EEIYM P G+ A + + L KS+YGLK A
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQA 242
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 99.8 bits (247), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 76/118 (64%), Gaps = 5/118 (4%)
Query: 226 LTYMVENEPQTFTEAMATLEAPFWKEAINSEIESIMQNHTWELVDLPSGCKPLGCKWIFK 285
+T ++ EP++ A L+ P W +A+ E++++ +N TW LV P LGCKW+FK
Sbjct: 20 ITTTIKKEPKSVIFA---LKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFK 76
Query: 286 KKLKKDGSIDKYKSRLVVKGFRQKEGLDYFDTYSPVSRITSIRVLVAIASLYNLEIHQ 343
KL DG++D+ K+RLV KGF Q+EG+ + +TYSPV R +IR ++ +A LE+ Q
Sbjct: 77 TKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQ--QLEVGQ 132