BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2440.1
(276 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G56380.1 | response regulator 17 | Chr3:20905480-20906368 FOR... 50 3e-07
AT2G40670.1 | response regulator 16 | Chr2:16970258-16971120 FOR... 48 2e-06
AT3G48100.1 | response regulator 5 | Chr3:17759112-17760740 REVE... 45 1e-05
AT5G62920.1 | response regulator 6 | Chr5:25252745-25254158 REVE... 44 3e-05
AT1G10470.1 | response regulator 4 | Chr1:3442624-3443759 REVERS... 45 4e-05
>AT3G56380.1 | response regulator 17 | Chr3:20905480-20906368
FORWARD LENGTH=153 | 201606
Length = 153
Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 159 TAGSIASAHRVLNEWESKGEKDFQGAQLEAQSQEKEIFILFIDYYLELPGLSGLELLKLY 218
++ + +A L E G D Q Q ++ + ++ ++ DY + PG++G ELLK
Sbjct: 42 SSCKVTTAENGLRALEYLGLGDPQ--QTDSLTNVMKVNLIITDYCM--PGMTGFELLKKV 97
Query: 219 KKTPHLRHIHVVIMSCGNDLDVYDSSIAEGALMCIADPLTVSQVELIILH 268
K++ +L+ + VVI+S N + +A GA M + PL +S VE + H
Sbjct: 98 KESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLSDVEKLKCH 147
>AT2G40670.1 | response regulator 16 | Chr2:16970258-16971120
FORWARD LENGTH=164 | 201606
Length = 164
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 163 IASAHRVLNEWESKGEKDFQGAQLEAQS-QEKEIFILFIDYYLELPGLSGLELLKLYKKT 221
+ +A L E G D Q ++A + ++ ++ DY + PG++G ELLK K++
Sbjct: 55 VTTAENALRALEYLGLGD-QNQHIDALTCNVMKVSLIITDYCM--PGMTGFELLKKVKES 111
Query: 222 PHLRHIHVVIMSCGNDLDVYDSSIAEGALMCIADPLTVSQVELIILH 268
+LR + VVIMS N + +A GA M + PL ++ VE + H
Sbjct: 112 SNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLKLADVEKLKCH 158
>AT3G48100.1 | response regulator 5 | Chr3:17759112-17760740 REVERSE
LENGTH=184 | 201606
Length = 184
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 16/97 (16%)
Query: 191 QEKEIFILFIDYYLELPGLSGLELLKLYKKTPHLRHIHVVIMSCGNDLDVYDSSIAEGAL 250
++ +I ++ DY +PG++G ELLK K++ R I VVIMS N L D + EGA
Sbjct: 77 EDLKINLIMTDY--SMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAE 134
Query: 251 MCIADPLTVSQVELI--------------ILHTRQLE 273
+ P+ ++ V+ + I+H R+LE
Sbjct: 135 DFLLKPVKLADVKRLRDSLMKAEERAFKNIMHKRELE 171
>AT5G62920.1 | response regulator 6 | Chr5:25252745-25254158 REVERSE
LENGTH=186 | 201606
Length = 186
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 181 FQGAQLEAQS---QEKEIFILFIDYYLELPGLSGLELLKLYKKTPHLRHIHVVIMSCGND 237
+ G +E +S ++ ++ ++ DY +PG++G ELLK K++ R + VVIMS N
Sbjct: 63 YLGLDVEEKSVGFEDLKVNLIMTDY--SMPGMTGYELLKKIKESSAFREVPVVIMSSENI 120
Query: 238 LDVYDSSIAEGALMCIADPLTVSQVE 263
L D + EGA + P+ +S V+
Sbjct: 121 LPRIDRCLEEGAEDFLLKPVKLSDVK 146
>AT1G10470.1 | response regulator 4 | Chr1:3442624-3443759 REVERSE
LENGTH=259 | 201606
Length = 259
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 180 DFQGAQLEAQSQEKE---IFILFIDYYLELPGLSGLELLKLYKKTPHLRHIHVVIMSCGN 236
+F G E S E + + ++ DY + PG++G ELLK K++ + R + VVIMS N
Sbjct: 71 EFLGLDNEKASAEFDRLKVDLIITDYCM--PGMTGYELLKKIKESSNFREVPVVIMSSEN 128
Query: 237 DLDVYDSSIAEGALMCIADPLTVSQVELIILH 268
L D + EGA + P+ ++ V+ + H
Sbjct: 129 VLTRIDRCLEEGAQDFLLKPVKLADVKRLRSH 160