BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2470.1
(439 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 98 5e-23
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 87 1e-17
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 87 1e-17
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 97.8 bits (242), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 96/184 (52%), Gaps = 17/184 (9%)
Query: 12 VWITQKSYVEKVLRRFNMENAKPVSTPFPVNYKLSSRQSPSTEAEKAAMSRVPYSSAVES 71
++++Q Y E++L M + KP+STP P+ KL+S S + + + + S V +
Sbjct: 54 LFLSQTKYAEQILNNAGMLDCKPMSTPLPL--KLNSSVSTAKYPDPSD-----FRSIVGA 106
Query: 72 LMFAMVCTRPDIAQAVGAVSRYMANPGREHWDAVKWILRFLKGTSDCVISYG-----GKN 126
L + + TRPDI+ AV V + M P +D +K +LR++KGT I +G
Sbjct: 107 LQY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGT----IFHGLYIHKNSK 161
Query: 127 LKLVGFVDADFGGDKDRARSTTGYVFALGGGAISWQSKLQSTVALSTTEAEYMSATQACK 186
L + F D+D+ G RSTTG+ LG ISW +K Q TV+ S+TE EY +
Sbjct: 162 LNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAA 221
Query: 187 EAIW 190
E W
Sbjct: 222 ELTW 225
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 7 RKNRKVWITQKSYVEKVLRRFNMENAKPVSTPFPVNYKLSSRQSPSTEAEKAAMSRVPYS 66
R + I Q+ Y +L + KP S P + S+ KA Y
Sbjct: 326 RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA------YR 379
Query: 67 SAVESLMFAMVCTRPDIAQAVGAVSRYMANPGREHWDAVKWILRFLKGTSDCVISYGGK- 125
+ LM+ + TR DI+ AV +S++ P H AV IL ++KGT + Y +
Sbjct: 380 RLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQA 438
Query: 126 NLKLVGFVDADFGGDKDRARSTTGYVFALGGGAISWQSKLQSTVALSTTEAEYMSATQAC 185
++L F DA F KD RST GY LG ISW+SK Q V+ S+ EAEY + + A
Sbjct: 439 EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFAT 498
Query: 186 KEAIWLKRL 194
E +WL +
Sbjct: 499 DEMMWLAQF 507
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 46/184 (25%)
Query: 207 DHMDRIPYASAVGSLMYAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLR------- 259
D +D Y +G LMY + TR DIS AV+ +S+F P H +AV +L
Sbjct: 371 DFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429
Query: 260 -------------------------------------VHGAPVSWRSMLQSTVALSTMEA 282
+ + +SW+S Q V+ S+ EA
Sbjct: 430 QGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEA 489
Query: 283 EYMAMTKGVKEALWLWGLLDDLGIK-QECVDVWCDSQSAIYLAKNQVHHARTKHIDVRYH 341
EY A++ E +WL +L + + ++CD+ +AI++A N V H RTKHI+ H
Sbjct: 490 EYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 549
Query: 342 FVRD 345
VR+
Sbjct: 550 SVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 7 RKNRKVWITQKSYVEKVLRRFNMENAKPVSTPFPVNYKLSSRQSPSTEAEKAAMSRVPYS 66
R + I Q+ Y +L + KP S P + S+ KA Y
Sbjct: 326 RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA------YR 379
Query: 67 SAVESLMFAMVCTRPDIAQAVGAVSRYMANPGREHWDAVKWILRFLKGTSDCVISYGGK- 125
+ LM+ + TR DI+ AV +S++ P H AV IL ++KGT + Y +
Sbjct: 380 RLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQA 438
Query: 126 NLKLVGFVDADFGGDKDRARSTTGYVFALGGGAISWQSKLQSTVALSTTEAEYMSATQAC 185
++L F DA F KD RST GY LG ISW+SK Q V+ S+ EAEY + + A
Sbjct: 439 EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFAT 498
Query: 186 KEAIWLKRL 194
E +WL +
Sbjct: 499 DEMMWLAQF 507
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 46/184 (25%)
Query: 207 DHMDRIPYASAVGSLMYAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLR------- 259
D +D Y +G LMY + TR DIS AV+ +S+F P H +AV +L
Sbjct: 371 DFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429
Query: 260 -------------------------------------VHGAPVSWRSMLQSTVALSTMEA 282
+ + +SW+S Q V+ S+ EA
Sbjct: 430 QGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEA 489
Query: 283 EYMAMTKGVKEALWLWGLLDDLGIK-QECVDVWCDSQSAIYLAKNQVHHARTKHIDVRYH 341
EY A++ E +WL +L + + ++CD+ +AI++A N V H RTKHI+ H
Sbjct: 490 EYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 549
Query: 342 FVRD 345
VR+
Sbjct: 550 SVRE 553