BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2480.1
(308 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 223 7e-66
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 223 7e-66
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 96 6e-24
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 223 bits (568), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 159/236 (67%), Gaps = 8/236 (3%)
Query: 75 YDTTYACVADDREPNSYQEACESVDASSWRASMEEEMEALYKNNTWTLVTLPPGRKAIGC 134
Y + C+A +EP++Y EA E + W +M++E+ A+ +TW + TLPP +K IGC
Sbjct: 73 YHSFLVCIAKAKEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGC 129
Query: 135 RWVFKLKKDANGNVERYRARLVAKGYAQKSGIDFNEIFAPVVRMTTIRIVLSMAAVFDLE 194
+WV+K+K +++G +ERY+ARLVAKGY Q+ GIDF E F+PV ++T+++++L+++A+++
Sbjct: 130 KWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189
Query: 195 LEQLDVKTAFLHGNLDEEIYMTQPEGFVEEDKGNL----VCQLNKSLYGLKQAPRCWYKR 250
L QLD+ AFL+G+LDEEIYM P G+ +L VC L KS+YGLKQA R W+ +
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLK 249
Query: 251 FDSFIVSLGFRRCEADHCAYVCDIDNGSFIILLLYVDDMLIAGANKSSIANLKARL 306
F ++ GF + +DH Y I F+ +L+YVDD++I N +++ LK++L
Sbjct: 250 FSVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQL 304
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 223 bits (568), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 159/236 (67%), Gaps = 8/236 (3%)
Query: 75 YDTTYACVADDREPNSYQEACESVDASSWRASMEEEMEALYKNNTWTLVTLPPGRKAIGC 134
Y + C+A +EP++Y EA E + W +M++E+ A+ +TW + TLPP +K IGC
Sbjct: 73 YHSFLVCIAKAKEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGC 129
Query: 135 RWVFKLKKDANGNVERYRARLVAKGYAQKSGIDFNEIFAPVVRMTTIRIVLSMAAVFDLE 194
+WV+K+K +++G +ERY+ARLVAKGY Q+ GIDF E F+PV ++T+++++L+++A+++
Sbjct: 130 KWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFT 189
Query: 195 LEQLDVKTAFLHGNLDEEIYMTQPEGFVEEDKGNL----VCQLNKSLYGLKQAPRCWYKR 250
L QLD+ AFL+G+LDEEIYM P G+ +L VC L KS+YGLKQA R W+ +
Sbjct: 190 LHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLK 249
Query: 251 FDSFIVSLGFRRCEADHCAYVCDIDNGSFIILLLYVDDMLIAGANKSSIANLKARL 306
F ++ GF + +DH Y I F+ +L+YVDD++I N +++ LK++L
Sbjct: 250 FSVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQL 304
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 96.3 bits (238), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Query: 86 REPNSYQEACESVDASSWRASMEEEMEALYKNNTWTLVTLPPGRKAIGCRWVFKLKKDAN 145
+EP S A + W +M+EE++AL +N TW LV P + +GC+WVFK K ++
Sbjct: 26 KEPKSVIFALKD---PGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD 82
Query: 146 GNVERYRARLVAKGYAQKSGIDFNEIFAPVVRMTTIRIVLSMA 188
G ++R +ARLVAKG+ Q+ GI F E ++PVVR TIR +L++A
Sbjct: 83 GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125