BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2530.1
(511 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G19940.1 | F-box and associated interaction domains-containin... 72 2e-13
AT1G32420.1 | F-box and associated interaction domains-containin... 71 2e-13
AT1G70970.1 | F-box and associated interaction domains-containin... 66 3e-11
AT1G19160.1 | F-box family protein | Chr1:6614162-6615214 REVERS... 65 3e-11
AT1G30790.1 | F-box and associated interaction domains-containin... 64 1e-10
>AT4G19940.1 | F-box and associated interaction domains-containing
protein | Chr4:10806195-10807430 FORWARD LENGTH=411 |
201606
Length = 411
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 172/420 (40%), Gaps = 83/420 (19%)
Query: 78 LEFKILNRLPVKSLARFKSVCKRWCYLIHKDQQFIHLHLTRFKTRLSPRLFIVVPQPPPP 137
L +IL RLP KSL RFKSV K W LI + F + L K PRLF+ +
Sbjct: 39 LVIEILTRLPAKSLMRFKSVSKLWSSLIC-SRNFTNRLL---KLSSPPRLFMCL------ 88
Query: 138 DKSLEDARYFHFWPYKEFHITADVLFEEDSTQLKLVVDTVREVDSSSYDAISKPVNGLIC 197
S D + K ++ + D T V+D + IS GL+C
Sbjct: 89 --SSSDNSHL-----KTVLLSLSSPPDSDITMSSSVIDQDLTMPGMKGYQISHVFRGLMC 141
Query: 198 LIDSYSEHLARICSISTGQ--VSPWFQASSIAAGEEHVGLPNHYAFGFDPATNEHKLICV 255
L+ S A+I + +T Q V P + S+I A EEH Y G DP +++K++C+
Sbjct: 142 LVKKSS---AQIYNTTTRQLVVLPDIEESTILA-EEHKSKKIMYHIGHDPVYDQYKVVCI 197
Query: 256 LTIRSDDRIFKYFLCG---ILTIGRQSNNRWRRI--KEVPPISLNDDYVYVNGVIYWSNH 310
++ R+ D + +Y +L + + + RWR+I K P + L + Y +
Sbjct: 198 VS-RASDEVEEYTFLSEHWVLLLEGEGSRRWRKISCKYPPHVPLGQGLTLSGRMHYLA-- 254
Query: 311 SLDLWTARSGYRHVYLVAFDVGNEKFRTITIPDFILDQRVLGNHLLFEEISQLFEVDGNL 370
W S R LV FD +E+F + +P I F + + L E G +
Sbjct: 255 ----WVRVSDNR--VLVIFDTHSEEFSMLQVPGDI-----------FWKYNGLLEYGGKI 297
Query: 371 AMI----IKLNNCMFNMYIYEDGDYKDKNEKINGTPTSSSFQKGKWKKVSCIALPFDMRN 426
A++ + + M +++ ED +K W + P ++
Sbjct: 298 AILNYTKVDIEGVM-ELWVVEDE------------------EKNLWSSKILVVNPLQLQM 338
Query: 427 NRTVKFHTFIGS---DDKILVTSSIWGPKSQNWEKNEQLSIYCYNWKKDTWTEVDVSGIP 483
++ T +G+ + ILV GP E +I Y+ +K+ ++++ G P
Sbjct: 339 VNSIISLTVLGTTRNGEVILVP----GP-----EDKTVFNILLYDLQKNHIRKIEIKGGP 389
>AT1G32420.1 | F-box and associated interaction domains-containing
protein | Chr1:11701995-11702903 FORWARD LENGTH=302 |
201606
Length = 302
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 129/324 (39%), Gaps = 71/324 (21%)
Query: 78 LEFKILNRLPVKSLARFKSVCKRWCYLIHKDQQFIHLHLTRFKTRLSPRLFIVVPQPPPP 137
L +IL +LP KSL RF+ V K+W +I + FI +TR T QPPP
Sbjct: 41 LTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRSLT-----------QPPPR 89
Query: 138 DKSLEDARYFH---FWPYKEFHITADVLFEEDSTQLKLVVDTVREVDSSSYDAISKPVNG 194
D L FH +P F I + + +++ + L T R +SSY V G
Sbjct: 90 DIKL----IFHHQVLYPGPHFFIFSST-YPQNTDKESL---TTR---ASSYHY----VRG 134
Query: 195 LICLIDSYSEHLARICSISTGQVSPWFQASSIAAGEEHVGLPNHYAFGFDPATNEHKLIC 254
LIC C + +P + FG+DP N++K++
Sbjct: 135 LICCWSH--------CPTTVDIYNPTTRQYYTVPDTNRYQYIETCFFGYDPVENQYKVMV 186
Query: 255 VLTIRSDDRIFKYFL----CGILTIGRQSNNRWRRIKEVPPISLNDDYVYVNGVIYWSNH 310
+ KY++ C + T+G WR I+ + L D V +NGVIY+
Sbjct: 187 LP---------KYYMEESPCQVFTVGDPIEKPWRDIQGIGVHFLLKDAVCINGVIYYQ-- 235
Query: 311 SLDLWTARSGYRHVY-LVAFDVGNEKFRTITIPDFILDQRVLGNHLLFEEISQLFEVDGN 369
A + Y Y LV+FDV +EKF + P + D L G
Sbjct: 236 ------ATNEYGSTYFLVSFDVRSEKFNHVKAPKILTDHPC-----------TLINYQGK 278
Query: 370 LAMIIKLNNCMFNMYIYEDGDYKD 393
L +I+ + +++ ED + K
Sbjct: 279 LGLIMCCKKGL-EIWVMEDAEKKQ 301
>AT1G70970.1 | F-box and associated interaction domains-containing
protein | Chr1:26759834-26761042 FORWARD LENGTH=402 |
201606
Length = 402
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 141/294 (47%), Gaps = 56/294 (19%)
Query: 72 HYDDDWLEFKILNRLPVKSLARFKSVCKRWCYLIHKDQQFIHLHLTRFKTRLSPRLFIVV 131
H +D L+ +I++ LP+KSL RF V K+W +I + +QF L+L R TR PRL +V
Sbjct: 10 HVED--LQTEIMSWLPLKSLLRFVIVSKKWASII-RGEQFKALYLRRSMTR--PRLMFMV 64
Query: 132 PQ----PPPPDKSLEDARYFHFWPYKEFHITADV--------LFEEDSTQLKLVVDTVRE 179
+ PP P+ +F + +E I + +++E +R
Sbjct: 65 RRIATLPPEPEMV-----WFQSFCKEERCIPGQLEVEFLFHSVYQEKIPYFSSGQQQLRV 119
Query: 180 VDSSSYDAISKPVNGLICLIDSYSEHLARICSISTGQVSPWFQASSIAAGEEHVGLPNHY 239
+++Y ++S+P+ GLICL SE +C+ T ++ ++ + H
Sbjct: 120 PPNTNYTSVSQPIGGLICL---QSETKFALCNPGTK------KSRALPDIQAHEKAFITS 170
Query: 240 AFGFDPATNEHKLICVLTIRSDD---RIFKYFLCGILTI--GRQSNNRWRRI----KEVP 290
G+D ATN K++C+ + + + R+++Y +LT+ G +S + WR I K+
Sbjct: 171 FLGYDEATNVFKVLCLTMVWAHEPSKRVYEY---QVLTVESGVESCS-WRGITCKEKDHT 226
Query: 291 PISLNDDYVYVNGVIYWSNHSLDLWTARSGYRHVYLV-AFDVGNEKFRTITIPD 343
P + + GV+Y+ ARS H LV +F+V +++F I +PD
Sbjct: 227 PETQG---LCKGGVLYYG--------ARSTSDHRPLVMSFNVRSQEFTAIELPD 269
>AT1G19160.1 | F-box family protein | Chr1:6614162-6615214 REVERSE
LENGTH=350 | 201606
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 155/380 (40%), Gaps = 101/380 (26%)
Query: 81 KILNRLPVKSLARFKSVCKRWCYLIHKDQQFIHLHLTRFKTRLSPRLFIVVPQPPPPDKS 140
+IL RLPVKSLARF V KR CY I + + FI+L+ +R TR S +F +
Sbjct: 9 EILLRLPVKSLARFLCVSKR-CYSIIRSRHFINLYQSRASTRESRVMF-----------A 56
Query: 141 LEDARYFHFWPYKEFHITADVLFEEDSTQLKLVVDTVREVDSSSYDAISKPVNGLICLID 200
D F W + L +V +DS+SY + VNGLIC+
Sbjct: 57 FRDTNTFFRWNF---------------FSLSQPPSSVTNIDSTSY-CMPVCVNGLICV-- 98
Query: 201 SYSEHLAR--ICSISTGQVS------PWFQASSIAAGEEHVGLPNHYAFGFDPATNEHKL 252
EH+ R IC+ T +++ P Q ++ + G+DP ++K+
Sbjct: 99 ---EHMFRLWICNPVTKKITLFPDCGPRKQFTT-------------WYMGYDPINYQYKV 142
Query: 253 ICVLTIRSDDRIFKYFLCGILTIGRQSNNRWRRIKEVPPI-SLNDDYVYVNGVIYWSNHS 311
+ + S + + ++ + T G + + WR I+ S V +GV+Y+ ++
Sbjct: 143 LYL----SREHLIAPYIVEVFTFGDEGS--WRMIEADENFHSPETRGVCTHGVLYYGAYT 196
Query: 312 LDLWTARSGYRHVYLVAFDVGNEKF-RTITIPDFILDQRVLGNHLLFEEISQLFEVDGNL 370
D +V FDV EKF + I +P H ++ + L + G L
Sbjct: 197 GD---------GAKIVRFDVRTEKFGKFIEMP-----AEACSIHGVYLGLYTLLDYQGKL 242
Query: 371 AMIIKLNNCMFNMYIYEDGDYKDKNEKINGTPTSSSFQKGKWKKVSCI----ALPFDMRN 426
++ +++++ ED +K +W KVS P+D+
Sbjct: 243 GLLATQATSTYDLWVLEDA------------------EKHEWSKVSIFITREMCPYDLIW 284
Query: 427 NRTVKFHTFIGSDDKILVTS 446
V F+ +++VT+
Sbjct: 285 PGVVG---FVAGSGELIVTA 301
>AT1G30790.1 | F-box and associated interaction domains-containing
protein | Chr1:10932713-10933912 FORWARD LENGTH=399 |
201606
Length = 399
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 148/336 (44%), Gaps = 46/336 (13%)
Query: 78 LEFKILNRLPVKSLARFKSVCKRWCYLIHKDQQFIHLHLTRFKTRLSPRLFIVVPQPPPP 137
L +IL RLP KSL +FK V K W +IH +Q FI + TR PR + P
Sbjct: 13 LTVEILTRLPAKSLMKFKCVSKLWSSIIH-NQSFIDSFYSISSTR--PRFIVAFSNGSFP 69
Query: 138 DKSLEDARYFHFWPYKEFHITADVLFEEDSTQLKLVVDTVREVDSSSYDAISKPVNGLIC 197
S ++ R F F E H ++ + T L + ++ ++ + IS VNG I
Sbjct: 70 --SDKEKRLFIFSSSHEGHESSSSVI----TNLDTTIPSLTVSNNLASRCIS--VNGFIA 121
Query: 198 LIDSYSEHLARICSISTGQVSPWFQASSIAAGEEHVGLPNHYAFGFDPATNEHKLICVLT 257
Y+ IC+ ST QV S A + G+DP ++ K + +++
Sbjct: 122 C-SLYTRFT--ICNPSTRQVIVLPILPSGRAPDMR-----STCIGYDPVDDQFKALALIS 173
Query: 258 --IRSDDRIFKYFLCGILTI-GRQSNNRWRRIK---EVPPISLNDDYVYVNGVIYWSNHS 311
I + D ++ +LT+ G + N WR+I+ +PP S V +NGV+Y+
Sbjct: 174 SCIPNKDSTVEHL---VLTLKGDKKNYSWRQIQGNNNIPPYSPVTMRVCINGVVYYG--- 227
Query: 312 LDLWTARSGYRHVYLVAFDVGNEKFRTITIPDFILDQRVLGNHLLFEEISQLFEVDGNLA 371
WT R V +V FDV +EK I P ++ + S L E G LA
Sbjct: 228 --AWTPRQSMNAV-IVCFDVRSEKITFIKTPKDVVR---------WCNDSILMEYKGKLA 275
Query: 372 MIIKLNNC---MFNMYIYEDGDYKDKNEKINGTPTS 404
I++ F++++ ED + ++ +++ P S
Sbjct: 276 SIVRNRYSRFDTFDLWVLEDIEKQEWSKQTCEIPLS 311