BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2540.1
(427 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45470.1 | FASCICLIN-like arabinogalactan protein 8 | Chr2:18... 105 1e-24
AT3G60900.1 | FASCICLIN-like arabinogalactan-protein 10 | Chr3:2... 84 3e-17
AT2G04780.2 | FASCICLIN-like arabinoogalactan 7 | Chr2:1677488-1... 47 1e-05
AT2G04780.1 | FASCICLIN-like arabinoogalactan 7 | Chr2:1677488-1... 47 1e-05
>AT2G45470.1 | FASCICLIN-like arabinogalactan protein 8 |
Chr2:18742797-18744059 REVERSE LENGTH=420 | 201606
Length = 420
Score = 105 bits (262), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 89/165 (53%), Gaps = 54/165 (32%)
Query: 1 MAPGILTVPAPSVSTLNITDLLDRSGRKTSSSLIIGSGVLKIYQSTINKRLMVCLDGGIM 60
+APG+LT PAPS S NIT LL+++G KT ++L++ SGVL
Sbjct: 173 IAPGVLTAPAPSASLSNITGLLEKAGCKTFANLLVSSGVL-------------------- 212
Query: 61 NPWIHESLGFMIPRIHESKPKIHYSYQFPHLIGILLRNPATKHTITLFAPKDEAFEAPGL 120
+ +ES A + +T+FAP DEAF+A G+
Sbjct: 213 -------------KTYES---------------------AVEKGLTVFAPSDEAFKAEGV 238
Query: 121 PDLSKLTNDEVIKILKFHALSRYNPIGTLKTSKDLISTLASNGGG 165
PDL+KLT EV+ +L++HAL+ Y P G+LKT+K+ ISTLA+NG G
Sbjct: 239 PDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAG 283
>AT3G60900.1 | FASCICLIN-like arabinogalactan-protein 10 |
Chr3:22499573-22500841 REVERSE LENGTH=422 | 201606
Length = 422
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 50/61 (81%)
Query: 105 ITLFAPKDEAFEAPGLPDLSKLTNDEVIKILKFHALSRYNPIGTLKTSKDLISTLASNGG 164
+T+FAP DEAF+A G+PDL+ LT EV+ +L++HAL+ Y P G+LKT+KD ISTLA+NG
Sbjct: 224 LTVFAPSDEAFKARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGA 283
Query: 165 G 165
G
Sbjct: 284 G 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 1 MAPGILTVPAPSVSTL-NITDLLDRSGRKTSSSLIIGSGVLKIYQSTINKRLMV 53
+APGILT PAPS + + NIT LL+++G KT ++L++ SGV+K ++ST+ K L V
Sbjct: 173 IAPGILTAPAPSSAGVSNITGLLEKAGCKTFANLLVSSGVIKTFESTVEKGLTV 226
>AT2G04780.2 | FASCICLIN-like arabinoogalactan 7 |
Chr2:1677488-1678252 FORWARD LENGTH=254 | 201606
Length = 254
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 101 TKHTITLFAPKDEAFEAPGLPDLSKLTNDEVIKILKFHALSRYNPIGTLK--TSKDLIST 158
T+ IT+F PKD+AF+A P LS LT D++ +++ FHAL Y + K + +ST
Sbjct: 80 TEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVST 139
Query: 159 LASNGGGGGVSRFVEQNAT 177
A GG +F + + T
Sbjct: 140 FA---GGQYSLKFTDVSGT 155
>AT2G04780.1 | FASCICLIN-like arabinoogalactan 7 |
Chr2:1677488-1678252 FORWARD LENGTH=254 | 201606
Length = 254
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 101 TKHTITLFAPKDEAFEAPGLPDLSKLTNDEVIKILKFHALSRYNPIGTLK--TSKDLIST 158
T+ IT+F PKD+AF+A P LS LT D++ +++ FHAL Y + K + +ST
Sbjct: 80 TEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVST 139
Query: 159 LASNGGGGGVSRFVEQNAT 177
A GG +F + + T
Sbjct: 140 FA---GGQYSLKFTDVSGT 155