BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2650.1
(583 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G51350.1 | ARM repeat superfamily protein | Chr1:19035851-190... 629 0.0
AT1G09270.3 | importin alpha isoform 4 | Chr1:2995162-2997833 FO... 47 4e-05
AT1G09270.2 | importin alpha isoform 4 | Chr1:2994506-2997833 FO... 46 9e-05
AT1G09270.1 | importin alpha isoform 4 | Chr1:2994506-2997833 FO... 46 9e-05
>AT1G51350.1 | ARM repeat superfamily protein |
Chr1:19035851-19038738 FORWARD LENGTH=666 | 201606
Length = 666
Score = 629 bits (1623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/567 (56%), Positives = 422/567 (74%), Gaps = 6/567 (1%)
Query: 8 TNRNPDLIDRLNSSDYATKLKALREVKNQIIGNKTKKLSYVKLGAVPTITNILVTAGDSD 67
NR D+ RL SSD KLKALREVKNQIIGN+TKKLS++KLGA+P I ++L A DSD
Sbjct: 18 NNRQSDVFSRLASSDPEVKLKALREVKNQIIGNRTKKLSFLKLGAIPAIASVLADADDSD 77
Query: 68 --SSLLVQSAAAIGSFACGVDVGVKAVLDSGVLPHLFRILSNPDDKVVDAGARSLRMIFQ 125
+++LVQSAAA+GSFACG + GV+AVLD+GV PHL R+L+N D+KVVDAGARSLRMIFQ
Sbjct: 78 ECNNILVQSAAALGSFACGFEAGVQAVLDAGVFPHLLRLLTNTDEKVVDAGARSLRMIFQ 137
Query: 126 SKLAPKYDFLEEKKLEFLLSLLNSENENVTELGASIITHSCETSSEQKLLCDAGVVDRLF 185
S APKYDFL+EK +EFL SLLNSENENV+ LGASII H+C TS EQ++LC+AGV+++L
Sbjct: 138 SNQAPKYDFLQEKNMEFLFSLLNSENENVSGLGASIIAHACGTSVEQRVLCEAGVLEKLV 197
Query: 186 TLLDGSLNQRDGSLESLAATVKNNSEVISKFVNLDNGRALSGITELLMDRYPRTRLLACI 245
LLDGSL+QR+ LESLA +KNN E +S FV L++G+ + +TEL DRYPRTRLL+C+
Sbjct: 198 ILLDGSLSQREACLESLATVLKNNPEAVSDFVGLESGKYFNSVTELTKDRYPRTRLLSCL 257
Query: 246 FLIAIGQTSPCYLHDIGIRTKLISILVELLEEPDRVGDEAPFVLANLIADKEDFQKVAFE 305
L+ I TSP Y ++G ++ LI+ L+ELL +P + GD+A L+ LIA+KED Q++A+E
Sbjct: 258 CLVVIYNTSPSYFINMGTKSSLITTLLELLNDPGQSGDDAALGLSCLIAEKEDLQQLAYE 317
Query: 306 VDGVIKLCKFLSKGS-IQAKRLEGILLALSELCSKLENCRFQFLSLQVMNLVTDALKHDL 364
D + + + L GS +Q+KRL+G+ L+L+ELCSKLE+CR FLSLQV++L+TDAL+H
Sbjct: 318 ADAIKNIVEILKTGSELQSKRLQGLFLSLAELCSKLEDCRCSFLSLQVLDLLTDALRHKD 377
Query: 365 TEVRTAACICIRSVTRSVKNLSAGHSINEMTVVPLVQLLNDQSTSVQVAALGAISNVVVD 424
+VR AACIC R+ RSVK+LSAG ++ ++PLVQLL+D S+SVQVA LGA++N+V+D
Sbjct: 378 ADVRAAACICFRNAARSVKSLSAGRFNSDHVMLPLVQLLHDPSSSVQVAVLGALNNIVMD 437
Query: 425 FKVRKSIFIQCGGVKHLVRLSKSMDSSLRLNAVWALRNLMFLLDRTGKEDILKELTVSTL 484
F KS FI+ GG+K L LSKSMD + R +A+ ALRNLMFL D KE ++ L
Sbjct: 438 FSSPKSSFIEYGGIKQLTELSKSMDPNTRCSALRALRNLMFLADIKRKELFYSDVKAQGL 497
Query: 485 ASLICDSETSTQEQALALVRNLVDGSVDSIEHVFSEDGSIINSIGRQMWSALKSEVCVQF 544
A LI D E QEQALAL+RNLVDG + SIE VF EDG I++++GRQ+ A ++++ +Q
Sbjct: 498 ACLISDPEPPVQEQALALLRNLVDGCISSIEFVFDEDGLILDTVGRQLRKAPQAQMAIQG 557
Query: 545 GFALVLMEPEEHGKELFNFSLRRACFP 571
+ L + G EL ++ FP
Sbjct: 558 MYVLTNV---ASGTELHKEAVMEQLFP 581
>AT1G09270.3 | importin alpha isoform 4 | Chr1:2995162-2997833
FORWARD LENGTH=456 | 201606
Length = 456
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 115/262 (43%), Gaps = 9/262 (3%)
Query: 263 IRTKLISILVELLEEP-DRVGDEAPFVLANLIADKEDFQKVAFEVDGVIKLCKFLSKGSI 321
I + I V+LL D V ++A + L N+ D + + + + L L++ S
Sbjct: 80 IEQGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLVLNYGALEPLLAQLNENS- 138
Query: 322 QAKRLEGILLALSELCSKLENCRFQFLSLQVMNLVTDALKHDLTEVRTAACICIRSVTRS 381
+ L LS C F+ + + ++ + + EV T AC + ++
Sbjct: 139 KLSMLRNATWTLSNFCRGKPPTPFEQVK-PALPILRQLIYLNDEEVLTDACWALSYLSDG 197
Query: 382 VKNLSAGHSINEMTVVP-LVQLLNDQSTSVQVAALGAISNVVVDFKVRKSIFIQCGGVKH 440
+ ++ E V P LV+LL QS +V + AL + N+V + I+ G + H
Sbjct: 198 PNDKI--QAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVTGDDSQTQFIIESGVLPH 255
Query: 441 LVR-LSKSMDSSLRLNAVWALRNLMFLLDRTGKEDILKELTVSTLASLICDSETSTQEQA 499
L L+++ S++ A W + N+ ++ E ++ + L L+ ++E +++A
Sbjct: 256 LYNLLTQNHKKSIKKEACWTISNIT-AGNKLQIEAVVGAGIILPLVHLLQNAEFDIKKEA 314
Query: 500 LALVRNLVD-GSVDSIEHVFSE 520
+ N GS + I+++ ++
Sbjct: 315 AWAISNATSGGSHEQIQYLVTQ 336
>AT1G09270.2 | importin alpha isoform 4 | Chr1:2994506-2997833
FORWARD LENGTH=538 | 201606
Length = 538
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 115/262 (43%), Gaps = 9/262 (3%)
Query: 263 IRTKLISILVELLEEP-DRVGDEAPFVLANLIADKEDFQKVAFEVDGVIKLCKFLSKGSI 321
I + I V+LL D V ++A + L N+ D + + + + L L++ S
Sbjct: 162 IEQGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLVLNYGALEPLLAQLNENS- 220
Query: 322 QAKRLEGILLALSELCSKLENCRFQFLSLQVMNLVTDALKHDLTEVRTAACICIRSVTRS 381
+ L LS C F+ + + ++ + + EV T AC + ++
Sbjct: 221 KLSMLRNATWTLSNFCRGKPPTPFEQVK-PALPILRQLIYLNDEEVLTDACWALSYLSDG 279
Query: 382 VKNLSAGHSINEMTVVP-LVQLLNDQSTSVQVAALGAISNVVVDFKVRKSIFIQCGGVKH 440
+ ++ E V P LV+LL QS +V + AL + N+V + I+ G + H
Sbjct: 280 PNDKI--QAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVTGDDSQTQFIIESGVLPH 337
Query: 441 LVR-LSKSMDSSLRLNAVWALRNLMFLLDRTGKEDILKELTVSTLASLICDSETSTQEQA 499
L L+++ S++ A W + N+ ++ E ++ + L L+ ++E +++A
Sbjct: 338 LYNLLTQNHKKSIKKEACWTISNIT-AGNKLQIEAVVGAGIILPLVHLLQNAEFDIKKEA 396
Query: 500 LALVRNLVD-GSVDSIEHVFSE 520
+ N GS + I+++ ++
Sbjct: 397 AWAISNATSGGSHEQIQYLVTQ 418
>AT1G09270.1 | importin alpha isoform 4 | Chr1:2994506-2997833
FORWARD LENGTH=538 | 201606
Length = 538
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 115/262 (43%), Gaps = 9/262 (3%)
Query: 263 IRTKLISILVELLEEP-DRVGDEAPFVLANLIADKEDFQKVAFEVDGVIKLCKFLSKGSI 321
I + I V+LL D V ++A + L N+ D + + + + L L++ S
Sbjct: 162 IEQGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLVLNYGALEPLLAQLNENS- 220
Query: 322 QAKRLEGILLALSELCSKLENCRFQFLSLQVMNLVTDALKHDLTEVRTAACICIRSVTRS 381
+ L LS C F+ + + ++ + + EV T AC + ++
Sbjct: 221 KLSMLRNATWTLSNFCRGKPPTPFEQVK-PALPILRQLIYLNDEEVLTDACWALSYLSDG 279
Query: 382 VKNLSAGHSINEMTVVP-LVQLLNDQSTSVQVAALGAISNVVVDFKVRKSIFIQCGGVKH 440
+ ++ E V P LV+LL QS +V + AL + N+V + I+ G + H
Sbjct: 280 PNDKI--QAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVTGDDSQTQFIIESGVLPH 337
Query: 441 LVR-LSKSMDSSLRLNAVWALRNLMFLLDRTGKEDILKELTVSTLASLICDSETSTQEQA 499
L L+++ S++ A W + N+ ++ E ++ + L L+ ++E +++A
Sbjct: 338 LYNLLTQNHKKSIKKEACWTISNIT-AGNKLQIEAVVGAGIILPLVHLLQNAEFDIKKEA 396
Query: 500 LALVRNLVD-GSVDSIEHVFSE 520
+ N GS + I+++ ++
Sbjct: 397 AWAISNATSGGSHEQIQYLVTQ 418