BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2790.1
(200 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66070.5 | RING/U-box superfamily protein | Chr5:26421923-264... 63 5e-12
AT5G66070.1 | RING/U-box superfamily protein | Chr5:26421923-264... 63 5e-12
AT5G66070.2 | RING/U-box superfamily protein | Chr5:26421923-264... 62 1e-11
AT2G42360.1 | RING/U-box superfamily protein | Chr2:17640907-176... 62 1e-11
AT5G06490.1 | RING/U-box superfamily protein | Chr5:1977996-1978... 60 6e-11
>AT5G66070.5 | RING/U-box superfamily protein |
Chr5:26421923-26423033 FORWARD LENGTH=221 | 201606
Length = 221
Score = 62.8 bits (151), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 107 LIDQAQLEPITDLELERFLKKIIIDETAEETTCSVCIQDLNDQDDARAPIGCNHIFHYNC 166
+ D A + +T L R K I D + E +CSVC+QD + R+ C+H+FH C
Sbjct: 144 IFDTAISKGLTGDSLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPC 203
Query: 167 ISTWLKANPTCPMCRK 182
I WL+ + +CP+CR+
Sbjct: 204 IDKWLRRHASCPLCRR 219
>AT5G66070.1 | RING/U-box superfamily protein |
Chr5:26421923-26423033 FORWARD LENGTH=221 | 201606
Length = 221
Score = 62.8 bits (151), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 107 LIDQAQLEPITDLELERFLKKIIIDETAEETTCSVCIQDLNDQDDARAPIGCNHIFHYNC 166
+ D A + +T L R K I D + E +CSVC+QD + R+ C+H+FH C
Sbjct: 144 IFDTAISKGLTGDSLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPC 203
Query: 167 ISTWLKANPTCPMCRK 182
I WL+ + +CP+CR+
Sbjct: 204 IDKWLRRHASCPLCRR 219
>AT5G66070.2 | RING/U-box superfamily protein |
Chr5:26421923-26423033 FORWARD LENGTH=245 | 201606
Length = 245
Score = 62.4 bits (150), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 107 LIDQAQLEPITDLELERFLKKIIIDETAEETTCSVCIQDLNDQDDARAPIGCNHIFHYNC 166
+ D A + +T L R K I D + E +CSVC+QD + R+ C+H+FH C
Sbjct: 168 IFDTAISKGLTGDSLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPC 227
Query: 167 ISTWLKANPTCPMCRK 182
I WL+ + +CP+CR+
Sbjct: 228 IDKWLRRHASCPLCRR 243
>AT2G42360.1 | RING/U-box superfamily protein |
Chr2:17640907-17641617 FORWARD LENGTH=236 | 201606
Length = 236
Score = 62.0 bits (149), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 36/77 (46%)
Query: 113 LEPITDLELERFLKKIIIDETAEETTCSVCIQDLNDQDDARAPIGCNHIFHYNCISTWLK 172
L P L F A T C+VC+ L +QD AR C HIFH +C+ TWL
Sbjct: 82 LNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLT 141
Query: 173 ANPTCPMCRKDTRKEER 189
TCP+CR + R
Sbjct: 142 TCSTCPVCRTEVEPRPR 158
>AT5G06490.1 | RING/U-box superfamily protein | Chr5:1977996-1978589
REVERSE LENGTH=197 | 201606
Length = 197
Score = 59.7 bits (143), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 132 ETAEETTCSVCIQDLNDQDDARAPIGCNHIFHYNCISTWLKANPTCPMCR 181
E++ + CS+C+ D D R CNH+FH NC+ WL+ +PTCP+CR
Sbjct: 122 ESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCR 171