BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2840.1
(84 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATCG00340.1 | Photosystem I%2C PsaA/PsaB protein | ChrC:37375-39... 97 7e-25
>ATCG00340.1 | Photosystem I%2C PsaA/PsaB protein | ChrC:37375-39579
REVERSE LENGTH=734 | 201606
Length = 734
Score = 96.7 bits (239), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 50/57 (87%)
Query: 1 MRTSRNLFHVAWQGNFESWVNNPLHIRHVAHAIWDPHFGQPAVEAFTRVDALGPIEV 57
+ TS NLFHVAWQGNFE+WV +PLH+R +AHAIWDPHFGQPAVEAFTR ALGP+ +
Sbjct: 59 LWTSGNLFHVAWQGNFETWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNI 115