BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2860.1
(247 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G28780.1 | PIF1 helicase | Chr5:10812907-10814173 REVERSE LEN... 106 5e-27
AT3G51690.1 | PIF1 helicase | Chr3:19176731-19178107 REVERSE LEN... 91 5e-21
AT3G51700.1 | PIF1 helicase | Chr3:19179443-19181145 REVERSE LEN... 91 7e-21
>AT5G28780.1 | PIF1 helicase | Chr5:10812907-10814173 REVERSE
LENGTH=337 | 201606
Length = 337
Score = 106 bits (265), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 80/135 (59%)
Query: 105 EYVTERTILSARNEDVSDINILTLNIFSEEKVTYFAADKMDEAEANDYTNAARYLSEFLN 164
+Y+TER IL+ NE V +IN L+ + Y ++ + +A+ A Y ++LN
Sbjct: 113 QYLTERGILTPHNEYVDEINAYMLSQVGGDSKEYLSSYSIGKADTIGADYEALYHVKYLN 172
Query: 165 SLNRPGFPPSKLELKVGCPIMLLRSLSPKDGMCNGTRLMVVNCASRVLECRILNGDKAGN 224
SL P P K+ LK G PIM +R+ + K+G+CNGTRL+V N +V+E +I+ G AG
Sbjct: 173 SLEFPSLPKHKISLKKGVPIMQMRNFNQKEGLCNGTRLIVTNLGEQVIEAQIVTGTHAGK 232
Query: 225 LVFIPRISLSPTFSD 239
+V IPR LSP S+
Sbjct: 233 MVSIPRFILSPPQSE 247
>AT3G51690.1 | PIF1 helicase | Chr3:19176731-19178107 REVERSE
LENGTH=331 | 201606
Length = 331
Score = 90.5 bits (223), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 85 LHSLISSTYPGLHVVGTSSSEYVTERTILSARNEDVSDINILTLNIFSEEKVTYFAADKM 144
+ +L+ Y G + + + ++ + IL R++DV IN L++ E+ + D +
Sbjct: 96 IKTLLKEVY-GEYFAKSYNPDFCHDSAILCHRDDDVDQINDYMLSLLPGEEKECLSTDSI 154
Query: 145 DEAEANDYTNAARYLSEFLNSLNRPGFPPSKLELKVGCPIMLLRSLSPKDGMCNGTRLMV 204
+ +D E LNS+ PG P KL LKVG P+MLLR L P G GTRL +
Sbjct: 155 SPSPNDDMFVPL----EVLNSIKVPGLPDFKLRLKVGAPVMLLRDLDPSRGFFTGTRLQI 210
Query: 205 VNCASRVLECRILNGDKAGNLVFIPRISLSPTFSDLSVQFIR 246
+LE I+ G+K G ++IPRI+ PT ++ +Q R
Sbjct: 211 TRLCGFLLEAMIIAGNKHGKKIWIPRIASYPTETNFPLQMRR 252
>AT3G51700.1 | PIF1 helicase | Chr3:19179443-19181145 REVERSE
LENGTH=344 | 201606
Length = 344
Score = 90.5 bits (223), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 3/170 (1%)
Query: 79 INKCNN-LHSLISSTYPGLHVVGTSSSEYVTERTILSARNEDVSDINILTLNIFSEEKVT 137
I +C + + +++ Y G + + ++ ER IL N+ +IN L+ E+
Sbjct: 90 ITECKDPIKTIVDEVY-GESFTESYNPDFYQERAILCHTNDVADEINDYMLSQLQGEETK 148
Query: 138 YFAADKMDEAEANDYTNAARYLSEFLNSLNRPGFPPSKLELKVGCPIMLLRSLSPKDGMC 197
+ AD + A+ + Y EFLNS+ PGFP KL LKVG P+MLLR L+P +
Sbjct: 149 CYGADTIYPTHASP-NDKMLYPLEFLNSIKIPGFPDFKLRLKVGAPVMLLRDLAPYGWLR 207
Query: 198 NGTRLMVVNCASRVLECRILNGDKAGNLVFIPRISLSPTFSDLSVQFIRR 247
GTRL + + VLE I+ G+ G V IPRI + ++ RR
Sbjct: 208 KGTRLQITRVETFVLEAMIITGNNHGEKVLIPRIPSDLREAKFPIKMRRR 257