BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2930.1
(446 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G33350.2 | Pentatricopeptide repeat (PPR) superfamily protein... 299 3e-96
AT1G33350.1 | Pentatricopeptide repeat (PPR) superfamily protein... 299 3e-96
AT5G56310.1 | Pentatricopeptide repeat (PPR) superfamily protein... 298 1e-95
AT4G37380.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 296 5e-94
AT3G62890.1 | Pentatricopeptide repeat (PPR) superfamily protein... 294 1e-93
>AT1G33350.2 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr1:12090071-12091687 REVERSE LENGTH=538 | 201606
Length = 538
Score = 299 bits (766), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 161/414 (38%), Positives = 253/414 (61%), Gaps = 16/414 (3%)
Query: 34 ITSWSLAIKTASSPQQALTLYKQMLNQSIPFENYSIV-FALKSFTHSFSSQNLSLIRHLH 92
+T++S ++ +S A + ++ M+N+S+P N+ I LKS + S+ + L+ H
Sbjct: 95 LTAYSSSLPLHAS--SAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLV---H 149
Query: 93 THLLKIGFCSDVHVATSLLRSYG--VCSFYDARKLFDEMPERNVMAFNTMINAYAKSLDL 150
THL K GF V V T+LL SY V AR+LFDEM ERNV+++ M++ YA+S D+
Sbjct: 150 THLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDI 209
Query: 151 KKARLIFDEMPVKDIASYSAMISGYLNNGNWNEGVKLFQEMLVLDSLKPDYIMLISILSG 210
A +F++MP +D+ S++A+++ NG + E V LF+ M+ S++P+ + ++ +LS
Sbjct: 210 SNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSA 269
Query: 211 CTRISSLGLLLGKSIHCFIEKNGWELNVQLGTVLVDVYAKCGFLKGAFRVFEKMNERNVV 270
C + +L L K IH F + +V + LVD+Y KCG L+ A VF+ +++++
Sbjct: 270 CAQTGTLQL--AKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLT 327
Query: 271 TWSVLICGFGNHGYSDEAFLVFKQMKKAGI---KPNEITFTGILCACNHAGLIEKGKKYF 327
W+ +I F HG S+EA VF++M K I KP+ ITF G+L AC H GL+ KG+ YF
Sbjct: 328 AWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYF 387
Query: 328 KEMIEEYKIEPGIRHYGCMVDLLGKGGRLEEAYELIKSMKLEPDIVIWGSLLAACKVHNQ 387
M + IEP I HYGC++DLLG+ GR +EA E++ +MK++ D IWGSLL ACK+H
Sbjct: 388 DLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGH 447
Query: 388 FETAERVIERVLEVAKPESDGGVYALISDIYTMNGKWEEAERVRELMVKKVRGY 441
+ AE ++ + VA ++GG A+++++Y G WEEA R R+ M+K Y
Sbjct: 448 LDLAEVAVKNL--VALNPNNGGYVAMMANLYGEMGNWEEARRARK-MIKHQNAY 498
Score = 89.0 bits (219), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 45/291 (15%)
Query: 149 DLKKARLIFDEMPVKDIASYSAMISGYLNN--GNWNEGVKLFQEMLVLDSLKPDYIMLIS 206
+L AR IFD + Y+A+++ Y ++ + + F+ M+ +P++ +
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 207 ILSGCTRISSLGLLLGKSIHCFIEKNGWELNVQLGTVLVDVYA-KCGFLKGAFRVFEKMN 265
+L +SS +H + K+G+ L V + T L+ YA + A ++F++M+
Sbjct: 132 VLKSTPYLSS--AFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMS 189
Query: 266 ERNVVTWSVLICGFGNHGYSDEAFLVFKQMKKAGIKPNEITFTGILCACNHAGLIEKGKK 325
ERNVV+W+ ++ G+ G A +F+ M + + ++ IL AC GL +
Sbjct: 190 ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVP----SWNAILAACTQNGLFLEAVS 245
Query: 326 YFKEMIEEYKIEP----------------------GIRHYG-------------CMVDLL 350
F+ MI E I P GI + +VDL
Sbjct: 246 LFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLY 305
Query: 351 GKGGRLEEAYELIKSMKLEPDIVIWGSLLAACKVHNQFETAERVIERVLEV 401
GK G LEEA + K M + + W S++ +H + E A V E ++++
Sbjct: 306 GKCGNLEEASSVFK-MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKL 355
>AT1G33350.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr1:12090071-12091687 REVERSE LENGTH=538 | 201606
Length = 538
Score = 299 bits (766), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 161/414 (38%), Positives = 253/414 (61%), Gaps = 16/414 (3%)
Query: 34 ITSWSLAIKTASSPQQALTLYKQMLNQSIPFENYSIV-FALKSFTHSFSSQNLSLIRHLH 92
+T++S ++ +S A + ++ M+N+S+P N+ I LKS + S+ + L+ H
Sbjct: 95 LTAYSSSLPLHAS--SAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLV---H 149
Query: 93 THLLKIGFCSDVHVATSLLRSYG--VCSFYDARKLFDEMPERNVMAFNTMINAYAKSLDL 150
THL K GF V V T+LL SY V AR+LFDEM ERNV+++ M++ YA+S D+
Sbjct: 150 THLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDI 209
Query: 151 KKARLIFDEMPVKDIASYSAMISGYLNNGNWNEGVKLFQEMLVLDSLKPDYIMLISILSG 210
A +F++MP +D+ S++A+++ NG + E V LF+ M+ S++P+ + ++ +LS
Sbjct: 210 SNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSA 269
Query: 211 CTRISSLGLLLGKSIHCFIEKNGWELNVQLGTVLVDVYAKCGFLKGAFRVFEKMNERNVV 270
C + +L L K IH F + +V + LVD+Y KCG L+ A VF+ +++++
Sbjct: 270 CAQTGTLQL--AKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLT 327
Query: 271 TWSVLICGFGNHGYSDEAFLVFKQMKKAGI---KPNEITFTGILCACNHAGLIEKGKKYF 327
W+ +I F HG S+EA VF++M K I KP+ ITF G+L AC H GL+ KG+ YF
Sbjct: 328 AWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYF 387
Query: 328 KEMIEEYKIEPGIRHYGCMVDLLGKGGRLEEAYELIKSMKLEPDIVIWGSLLAACKVHNQ 387
M + IEP I HYGC++DLLG+ GR +EA E++ +MK++ D IWGSLL ACK+H
Sbjct: 388 DLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGH 447
Query: 388 FETAERVIERVLEVAKPESDGGVYALISDIYTMNGKWEEAERVRELMVKKVRGY 441
+ AE ++ + VA ++GG A+++++Y G WEEA R R+ M+K Y
Sbjct: 448 LDLAEVAVKNL--VALNPNNGGYVAMMANLYGEMGNWEEARRARK-MIKHQNAY 498
Score = 89.0 bits (219), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 45/291 (15%)
Query: 149 DLKKARLIFDEMPVKDIASYSAMISGYLNN--GNWNEGVKLFQEMLVLDSLKPDYIMLIS 206
+L AR IFD + Y+A+++ Y ++ + + F+ M+ +P++ +
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 207 ILSGCTRISSLGLLLGKSIHCFIEKNGWELNVQLGTVLVDVYA-KCGFLKGAFRVFEKMN 265
+L +SS +H + K+G+ L V + T L+ YA + A ++F++M+
Sbjct: 132 VLKSTPYLSS--AFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMS 189
Query: 266 ERNVVTWSVLICGFGNHGYSDEAFLVFKQMKKAGIKPNEITFTGILCACNHAGLIEKGKK 325
ERNVV+W+ ++ G+ G A +F+ M + + ++ IL AC GL +
Sbjct: 190 ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVP----SWNAILAACTQNGLFLEAVS 245
Query: 326 YFKEMIEEYKIEP----------------------GIRHYG-------------CMVDLL 350
F+ MI E I P GI + +VDL
Sbjct: 246 LFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLY 305
Query: 351 GKGGRLEEAYELIKSMKLEPDIVIWGSLLAACKVHNQFETAERVIERVLEV 401
GK G LEEA + K M + + W S++ +H + E A V E ++++
Sbjct: 306 GKCGNLEEASSVFK-MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKL 355
>AT5G56310.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr5:22802322-22803914 FORWARD LENGTH=530 | 201606
Length = 530
Score = 298 bits (763), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 265/441 (60%), Gaps = 19/441 (4%)
Query: 11 FSHPKYYHQILPYYYYLTNKFQNITSWSLAIKTASSPQQALTLYKQMLNQSIPFENYSIV 70
+++ + HQ P Y L N I + SL + ++ A+T+Y+++ + ++
Sbjct: 65 YAYSVFTHQPCPNTY-LHNTM--IRALSL-LDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 71 FALKSFTHSFSSQNLSLIRHLHTHLLKIGFCSDVHVATSLLRSYGVCS-FYDARKLFDEM 129
F LK + ++ R +H ++ GF S VHV T L++ Y C DARK+FDEM
Sbjct: 121 FVLKI---AVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 130 PERNVMAFNTMINAYAKSLDLKKARLIFDEMP--VKDIASYSAMISGYLNNGNWNEGVKL 187
++V +N ++ Y K ++ +AR + + MP V++ S++ +ISGY +G +E +++
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 188 FQEMLVLDSLKPDYIMLISILSGCTRISSLGLLLGKSIHCFIEKNGWELNVQLGTVLVDV 247
FQ ML +++++PD + L+++LS C + SL L G+ I +++ G V L ++D+
Sbjct: 238 FQRML-MENVEPDEVTLLAVLSACADLGSLEL--GERICSYVDHRGMNRAVSLNNAVIDM 294
Query: 248 YAKCGFLKGAFRVFEKMNERNVVTWSVLICGFGNHGYSDEAFLVFKQMKKAGIKPNEITF 307
YAK G + A VFE +NERNVVTW+ +I G HG+ EA +F +M KAG++PN++TF
Sbjct: 295 YAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTF 354
Query: 308 TGILCACNHAGLIEKGKKYFKEMIEEYKIEPGIRHYGCMVDLLGKGGRLEEAYELIKSMK 367
IL AC+H G ++ GK+ F M +Y I P I HYGCM+DLLG+ G+L EA E+IKSM
Sbjct: 355 IAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMP 414
Query: 368 LEPDIVIWGSLLAACKVHNQFETAERVIERVLEVAKPESDGGVYALISDIYTMNGKWEEA 427
+ + IWGSLLAA VH+ E ER + ++++ +P + G Y L++++Y+ G+W+E+
Sbjct: 415 FKANAAIWGSLLAASNVHHDLELGERALSELIKL-EPNNSGN-YMLLANLYSNLGRWDES 472
Query: 428 ERVRELM----VKKVRGYSFV 444
+R +M VKK+ G S +
Sbjct: 473 RMMRNMMKGIGVKKMAGESSI 493
>AT4G37380.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr4:17572040-17573938 REVERSE LENGTH=632 |
201606
Length = 632
Score = 296 bits (759), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 166/432 (38%), Positives = 257/432 (59%), Gaps = 21/432 (4%)
Query: 12 SHPKYYHQILPYYYYLTNKFQNITSWSLAIKTASS---PQQALTLYKQMLNQSI-PFENY 67
SH K H + ++ + ++ ++ AI TAS QA LY Q+L+ I P E
Sbjct: 76 SHGKIRHSLALFHQTID---PDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNE-- 130
Query: 68 SIVFALKSFTHSFSSQNLSLIRHLHTHLLKIGFCSDVHVATSLLRSYGVC-SFYDARKLF 126
F S S S+++ LI HTH+LK G D +VAT L+ Y A+K+F
Sbjct: 131 ---FTFSSLLKSCSTKSGKLI---HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVF 184
Query: 127 DEMPERNVMAFNTMINAYAKSLDLKKARLIFDEMPVKDIASYSAMISGYLNNGNWNEGVK 186
D MPER++++ MI YAK +++ AR +FD M +DI S++ MI GY +G N+ +
Sbjct: 185 DRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALM 244
Query: 187 LFQEMLVLDSLKPDYIMLISILSGCTRISSLGLLLGKSIHCFIEKNGWELNVQLGTVLVD 246
LFQ++L KPD I +++ LS C++I +L G+ IH F++ + LNV++ T L+D
Sbjct: 245 LFQKLLAEGKPKPDEITVVAALSACSQIGALET--GRWIHVFVKSSRIRLNVKVCTGLID 302
Query: 247 VYAKCGFLKGAFRVFEKMNERNVVTWSVLICGFGNHGYSDEAFLVFKQMKK-AGIKPNEI 305
+Y+KCG L+ A VF +++V W+ +I G+ HGYS +A +F +M+ G++P +I
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 362
Query: 306 TFTGILCACNHAGLIEKGKKYFKEMIEEYKIEPGIRHYGCMVDLLGKGGRLEEAYELIKS 365
TF G L AC HAGL+ +G + F+ M +EY I+P I HYGC+V LLG+ G+L+ AYE IK+
Sbjct: 363 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN 422
Query: 366 MKLEPDIVIWGSLLAACKVHNQFETAERVIERVLEVAKPESDGGVYALISDIYTMNGKWE 425
M ++ D V+W S+L +CK+H F + + E ++ + S G+Y L+S+IY G +E
Sbjct: 423 MNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNS--GIYVLLSNIYASVGDYE 480
Query: 426 EAERVRELMVKK 437
+VR LM +K
Sbjct: 481 GVAKVRNLMKEK 492
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 37/192 (19%)
Query: 247 VYAKCGFLKGAFRVFEKMNERNVVTWSVLICGFGNHGYSDEAFLVFKQMKKAGIKPNEIT 306
YA G ++ + +F + + ++ ++ I +G D+AFL++ Q+ + I PNE T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 307 FTGILCACN----------------------HAGLIE---------KGKKYFKEMIEEYK 335
F+ +L +C+ GL++ +K F M E
Sbjct: 133 FSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 336 IEPGIRHYGCMVDLLGKGGRLEEAYELIKSMKLEPDIVIWGSLLAACKVHNQFETAERVI 395
+ M+ K G +E A L SM E DIV W ++ H A +
Sbjct: 193 VSS-----TAMITCYAKQGNVEAARALFDSM-CERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 396 ERVLEVAKPESD 407
+++L KP+ D
Sbjct: 247 QKLLAEGKPKPD 258
>AT3G62890.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr3:23246168-23247973 FORWARD LENGTH=573 | 201606
Length = 573
Score = 294 bits (752), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 161/425 (37%), Positives = 258/425 (60%), Gaps = 24/425 (5%)
Query: 37 WSLAIKT----ASSPQQ--ALTLYKQMLNQSIPFENYSIVFALKSFTHSFSSQNLSLIRH 90
W++ I+ SSPQ+ +++Y +M N + + ++ F L SF + +L L +
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPL---HLPLGQR 83
Query: 91 LHTHLLKIGFCSDVHVATSLLRSYGVC-SFYDARKLFDEMPERNVMAFNTMINAYAKSLD 149
H +L G D V TSLL Y C A+++FD+ +++ A+N+++NAYAK+
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 150 LKKARLIFDEMPVKDIASYSAMISGYLNNGNWNEGVKLFQEMLVLDS----LKPDYIMLI 205
+ AR +FDEMP +++ S+S +I+GY+ G + E + LF+EM + ++P+ +
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 206 SILSGCTRISSLGLLLGKSIHCFIEKNGWELNVQLGTVLVDVYAKCGFLKGAFRVFEKM- 264
++LS C R+ +L GK +H +I+K E+++ LGT L+D+YAKCG L+ A RVF +
Sbjct: 204 TVLSACGRLGALEQ--GKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 265 NERNVVTWSVLICGFGNHGYSDEAFLVFKQMKKA-GIKPNEITFTGILCACNHAGLIEKG 323
++++V +S +IC +G +DE F +F +M + I PN +TF GIL AC H GLI +G
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 324 KKYFKEMIEEYKIEPGIRHYGCMVDLLGKGGRLEEAYELIKSMKLEPDIVIWGSLLAACK 383
K YFK MIEE+ I P I+HYGCMVDL G+ G ++EA I SM +EPD++IWGSLL+ +
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 384 VHNQFETAERVIERVLEVAKPESDGGVYALISDIYTMNGKWEEAERVRELM----VKKVR 439
+ +T E ++R++E+ S G Y L+S++Y G+W E + +R M + KV
Sbjct: 382 MLGDIKTCEGALKRLIELDPMNS--GAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVP 439
Query: 440 GYSFV 444
G S+V
Sbjct: 440 GCSYV 444