BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2960.1
(962 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G47350.1 | F-box associated ubiquitination effector family pr... 64 5e-10
AT4G00155.1 | retrotransposon Gag | Chr4:62235-62567 FORWARD LEN... 54 1e-08
AT2G15180.1 | Zinc knuckle (CCHC-type) family protein | Chr2:658... 50 8e-06
AT1G47370.1 | Toll-Interleukin-Resistance (TIR) domain family pr... 49 2e-05
AT4G13320.1 | hypothetical protein | Chr4:7753436-7754086 FORWAR... 45 9e-05
>AT1G47350.1 | F-box associated ubiquitination effector family
protein | Chr1:17358447-17360722 REVERSE LENGTH=528 |
201606
Length = 528
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 190 LFRKFHNLRQNNRSVDEYTEEFYLLQARNDLNEDEDQSVACYIVGLRLPIQDQVDLHDIT 249
++ K NLR RSV+EY EEFYLL ND+N+ + Q V+ I LR +Q+ + D T
Sbjct: 1 MYNKLQNLRHETRSVEEYAEEFYLLLTFNDINDSQTQLVSRLIGELRSQLQNSLSQFDPT 60
Query: 250 RVDEAYRYALKIEGQLKRSS 269
V EA+R A E Q++ +S
Sbjct: 61 TVSEAHRRAASFEKQMRSAS 80
>AT4G00155.1 | retrotransposon Gag | Chr4:62235-62567 FORWARD
LENGTH=110 | 201606
Length = 110
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 148 ALVWWKQVQEMRIRKGKEKIRSWDRMKAKLREKFLPSDYHQTLFRKFHNLRQNNRSVDEY 207
A WW+Q Q+ R R GK I+SWD++K KL + FLP Y ++ + N++Q D++
Sbjct: 2 AASWWQQKQKTRKRAGKNPIKSWDKLKEKLCKTFLPPHYTSSVSNRLKNVKQRAGFGDDF 61
Query: 208 TEEFYLLQARNDLNEDEDQSVACYI 232
T ++ N+ E CY+
Sbjct: 62 TRNCHV--HVNNFVEKPTYDRDCYV 84
>AT2G15180.1 | Zinc knuckle (CCHC-type) family protein |
Chr2:6588743-6590167 REVERSE LENGTH=474 | 201606
Length = 474
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 115 FLDWVDRVDQFFEWKDMPEERKVKFVSLKLKGHALVWWKQVQEMRIRKGKEKIRSWDRMK 174
+L W ++ +FE+ +E K+ +LKG AL WW Q + R + + IR+W+R+K
Sbjct: 119 YLQWESNMNYYFEFHSTAQEDKLSIALGQLKGSALWWWDQDEYNRWYERRAPIRTWERLK 178
Query: 175 AKLREKFLP 183
+ K+ P
Sbjct: 179 WNMCAKYSP 187
>AT1G47370.1 | Toll-Interleukin-Resistance (TIR) domain family
protein | Chr1:17365898-17368703 REVERSE LENGTH=363 |
201606
Length = 363
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 131 MPEERKVKFVSLKLKGHALVWWKQVQEMRIRKGKEKIRSWDRMKAKLREKF 181
+PEER+V + K GHA WW Q + R R GK I W+++K K ++ +
Sbjct: 307 LPEERRVALEATKFCGHAAYWWNQTKTTRARIGKVLIHFWEKLKKKFKDTY 357
>AT4G13320.1 | hypothetical protein | Chr4:7753436-7754086 FORWARD
LENGTH=216 | 201606
Length = 216
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 403 LFRTTCTAGGKLCSLIVDGGSTENFVSQEMVDKLKLKTKPLTKPYNVRWFKEGNEVLVKE 462
+FRT C + C L++ GG+ N +S+ +V +LKLKT V + ++V +E
Sbjct: 98 VFRTQCVINDEACRLVLYGGN--NIISKGLVKQLKLKTLKKYPSVRVMATRREDKV-AEE 154
Query: 463 RCLVKFSIRKRYKDEVWCDIVPL--EVCHILLGRPWQYDRKTHHDG 506
C V SI YKD+V C +V + E +L G PW Y + H+G
Sbjct: 155 TCRVPVSIGDFYKDKVTCYVVNMEEEEDQLLFGGPWLYRVQATHNG 200