BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2970.1
(253 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 219 3e-65
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 219 3e-65
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 142 2e-41
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 80 6e-19
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 219 bits (558), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 156/237 (65%), Gaps = 3/237 (1%)
Query: 1 MLGCRPASTPMDPNLKQTIESGELLPDPSRYQRLVGRLIYLTNTRPDLTYAVSVVSKFMH 60
+LGC+P+S PMDP++ + SG D Y+RL+GRL+YL TR D+++AV+ +S+F
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSE 407
Query: 61 APRTAHMDAAYHILRYLKTCPGLGLFYATGAQSGLSSFTDADYAGSKGDRRSTSGICVFR 120
APR AH A IL Y+K G GLFY++ A+ L F+DA + K RRST+G C+F
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 121 GNHLLAWKSKKQAVVSRSSAESEYRAMAQSTCEIIWLRSLLTKLGFPEMESSTLFCDNKS 180
G L++WKSKKQ VVS+SSAE+EYRA++ +T E++WL +L P + + LFCDN +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 181 AIMLSSDSVLHERTKHIEVDIHFIREK-VYSGVIKPIFVSSSNQTADMFTKPVGPSL 236
AI +++++V HERTKHIE D H +RE+ VY + F + Q D FT+ + P L
Sbjct: 528 AIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPIL 582
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 219 bits (558), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 156/237 (65%), Gaps = 3/237 (1%)
Query: 1 MLGCRPASTPMDPNLKQTIESGELLPDPSRYQRLVGRLIYLTNTRPDLTYAVSVVSKFMH 60
+LGC+P+S PMDP++ + SG D Y+RL+GRL+YL TR D+++AV+ +S+F
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSE 407
Query: 61 APRTAHMDAAYHILRYLKTCPGLGLFYATGAQSGLSSFTDADYAGSKGDRRSTSGICVFR 120
APR AH A IL Y+K G GLFY++ A+ L F+DA + K RRST+G C+F
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 121 GNHLLAWKSKKQAVVSRSSAESEYRAMAQSTCEIIWLRSLLTKLGFPEMESSTLFCDNKS 180
G L++WKSKKQ VVS+SSAE+EYRA++ +T E++WL +L P + + LFCDN +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 181 AIMLSSDSVLHERTKHIEVDIHFIREK-VYSGVIKPIFVSSSNQTADMFTKPVGPSL 236
AI +++++V HERTKHIE D H +RE+ VY + F + Q D FT+ + P L
Sbjct: 528 AIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPIL 582
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 142 bits (358), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 100/156 (64%), Gaps = 1/156 (0%)
Query: 1 MLGCRPASTPMDPNLKQTIESGELLPDPSRYQRLVGRLIYLTNTRPDLTYAVSVVSKFMH 60
ML C+P STP+ L ++ + + PDPS ++ +VG L YLT TRPD++YAV++V + MH
Sbjct: 71 MLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 129
Query: 61 APRTAHMDAAYHILRYLKTCPGLGLFYATGAQSGLSSFTDADYAGSKGDRRSTSGICVFR 120
P A D +LRY+K GL+ ++ + +F D+D+AG RRST+G C F
Sbjct: 130 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189
Query: 121 GNHLLAWKSKKQAVVSRSSAESEYRAMAQSTCEIIW 156
G ++++W +K+Q VSRSS E+EYRA+A + E+ W
Sbjct: 190 GCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 80.1 bits (196), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 39 IYLTNTRPDLTYAVSVVSKFMHAPRTAHMDAAYHILRYLKTCPGLGLFYATGAQSGLSSF 98
+YLT TRPDLT+AV+ +S+F A RTA M A Y +L Y+K G GLFY+ + L +F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 99 TDADYAGSKGDRRSTSGIC 117
D+D+A RRS +G C
Sbjct: 61 ADSDWASCPDTRRSVTGFC 79