BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3100.1
(551 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01410.2 | Polynucleotidyl transferase%2C ribonuclease H-like... 69 2e-12
AT3G01410.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 69 2e-12
AT1G24090.1 | RNase H family protein | Chr1:8520834-8522737 FORW... 65 6e-11
AT5G51080.2 | RNase H family protein | Chr5:20769022-20770675 RE... 64 9e-11
AT5G51080.1 | RNase H family protein | Chr5:20769022-20770675 RE... 64 9e-11
>AT3G01410.2 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:153650-155439 REVERSE
LENGTH=294 | 201606
Length = 294
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 297 LSVDGSS--NMNGVGLGIALTSPEGDLIQRVIRCTFKATNNEAEYEALIAGLTLAKEMGI 354
+ DG+S N G G L + + ++ + ATNN AEY AL+ GL A + G
Sbjct: 157 IEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGF 216
Query: 355 QRLDVKSDSQLIVNQLQGTYQARDAKMTAYLAHVKELQTSFKEMNITQIPRLENGHADAL 414
+ + V DS L+ Q+QG ++ KM KEL SFK +I I R +N AD
Sbjct: 217 KNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQ 276
Query: 415 AN 416
AN
Sbjct: 277 AN 278
>AT3G01410.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:153650-155439 REVERSE
LENGTH=294 | 201606
Length = 294
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 297 LSVDGSS--NMNGVGLGIALTSPEGDLIQRVIRCTFKATNNEAEYEALIAGLTLAKEMGI 354
+ DG+S N G G L + + ++ + ATNN AEY AL+ GL A + G
Sbjct: 157 IEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGF 216
Query: 355 QRLDVKSDSQLIVNQLQGTYQARDAKMTAYLAHVKELQTSFKEMNITQIPRLENGHADAL 414
+ + V DS L+ Q+QG ++ KM KEL SFK +I I R +N AD
Sbjct: 217 KNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQ 276
Query: 415 AN 416
AN
Sbjct: 277 AN 278
>AT1G24090.1 | RNase H family protein | Chr1:8520834-8522737 FORWARD
LENGTH=353 | 201606
Length = 353
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 291 SEQKWNLSVDGSSNMN-GV-GLGIALTSPEGDLIQRVIRCTFKATNNEAEYEALIAGLTL 348
S++ + DG+S N G+ G L + +G LI RV + ATNN AEY ALI GL
Sbjct: 213 SDETCFIEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKY 272
Query: 349 AKEMGIQRLDVKSDSQLIVNQLQGTYQARDAKMTAYLAHVKELQTSFKEMNITQIPRLEN 408
A E G + + VK DS+L+ Q++G ++ + K L I+ + R N
Sbjct: 273 AIEKGYKNIKVKGDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHVLRNLN 332
Query: 409 GHADALANLG 418
AD ANL
Sbjct: 333 ADADEQANLA 342
>AT5G51080.2 | RNase H family protein | Chr5:20769022-20770675
REVERSE LENGTH=322 | 201606
Length = 322
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 274 PNILIQAEK--ELLCLTDKSEQKWNLSVDGSSNMN-GV-GLGIALTSPEGDLIQRVIRCT 329
P+ + EK EL D S + + DG+S N G+ G L + +G LI ++ +
Sbjct: 163 PSASMSVEKLAELEPSADTSYETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGL 222
Query: 330 FKATNNEAEYEALIAGLTLAKEMGIQRLDVKSDSQLIVNQLQGTYQARDAKMTAYLAHVK 389
ATNN AEY LI GL A E G ++ VK+DS+L+ Q++G ++ ++ K
Sbjct: 223 GIATNNAAEYHGLILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAK 282
Query: 390 ELQTSFKEMNITQIPRLENGHADALANLGSSI 421
+L I+ + R N AD AN+ + +
Sbjct: 283 QLSDKCLSFEISHVLRSLNSDADEQANMAARL 314
>AT5G51080.1 | RNase H family protein | Chr5:20769022-20770675
REVERSE LENGTH=322 | 201606
Length = 322
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 274 PNILIQAEK--ELLCLTDKSEQKWNLSVDGSSNMN-GV-GLGIALTSPEGDLIQRVIRCT 329
P+ + EK EL D S + + DG+S N G+ G L + +G LI ++ +
Sbjct: 163 PSASMSVEKLAELEPSADTSYETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGL 222
Query: 330 FKATNNEAEYEALIAGLTLAKEMGIQRLDVKSDSQLIVNQLQGTYQARDAKMTAYLAHVK 389
ATNN AEY LI GL A E G ++ VK+DS+L+ Q++G ++ ++ K
Sbjct: 223 GIATNNAAEYHGLILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAK 282
Query: 390 ELQTSFKEMNITQIPRLENGHADALANLGSSI 421
+L I+ + R N AD AN+ + +
Sbjct: 283 QLSDKCLSFEISHVLRSLNSDADEQANMAARL 314