BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3200.1
(135 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10160.1 | DHFS-FPGS homolog C | Chr3:3139588-3143949 REVERSE... 61 2e-11
AT3G55630.1 | DHFS-FPGS homolog D | Chr3:20636785-20639395 FORWA... 50 1e-07
AT3G55630.5 | DHFS-FPGS homolog D | Chr3:20637599-20639395 FORWA... 49 1e-07
AT3G55630.2 | DHFS-FPGS homolog D | Chr3:20636785-20639395 FORWA... 49 1e-07
AT3G55630.3 | DHFS-FPGS homolog D | Chr3:20636785-20639395 FORWA... 49 2e-07
>AT3G10160.1 | DHFS-FPGS homolog C | Chr3:3139588-3143949 REVERSE
LENGTH=625 | 201606
Length = 625
Score = 60.8 bits (146), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 52/127 (40%), Gaps = 54/127 (42%)
Query: 7 NTLRQIATHKAGIFKPHIPGFTVLQLPEAMDVIQEKASELK---------------GQSL 51
NTL IA HKAGIFKP IP FTV QL EAMDV+Q+ A+ L+ G +L
Sbjct: 268 NTLADIAFHKAGIFKPQIPAFTVPQLSEAMDVLQKTANNLEVPLEVVAPLEPKKLDGVTL 327
Query: 52 DL---------------------------------------PAPFLRDLATAHLSGLAQI 72
L P F R LATA L G AQ+
Sbjct: 328 GLSGDHQLVNAGLAVSLSRCWLQRTGNWKKIFPNESKETEIPVAFCRGLATARLHGRAQV 387
Query: 73 FYDAVVD 79
+D V D
Sbjct: 388 VHDVVSD 394
>AT3G55630.1 | DHFS-FPGS homolog D | Chr3:20636785-20639395 FORWARD
LENGTH=470 | 201606
Length = 470
Score = 49.7 bits (117), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 8 TLRQIATHKAGIFKPHIPGFTVLQLPEAMDVIQEKASELK 47
TL +IA KAGIFK +P FTV Q EAM V+ EKAS+L+
Sbjct: 174 TLAEIAAEKAGIFKSGVPAFTVAQPDEAMRVLNEKASKLE 213
>AT3G55630.5 | DHFS-FPGS homolog D | Chr3:20637599-20639395 FORWARD
LENGTH=358 | 201606
Length = 358
Score = 49.3 bits (116), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 8 TLRQIATHKAGIFKPHIPGFTVLQLPEAMDVIQEKASELK 47
TL +IA KAGIFK +P FTV Q EAM V+ EKAS+L+
Sbjct: 62 TLAEIAAEKAGIFKSGVPAFTVAQPDEAMRVLNEKASKLE 101
>AT3G55630.2 | DHFS-FPGS homolog D | Chr3:20636785-20639395 FORWARD
LENGTH=491 | 201606
Length = 491
Score = 49.3 bits (116), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 8 TLRQIATHKAGIFKPHIPGFTVLQLPEAMDVIQEKASELK 47
TL +IA KAGIFK +P FTV Q EAM V+ EKAS+L+
Sbjct: 195 TLAEIAAEKAGIFKSGVPAFTVAQPDEAMRVLNEKASKLE 234
>AT3G55630.3 | DHFS-FPGS homolog D | Chr3:20636785-20639395 FORWARD
LENGTH=492 | 201606
Length = 492
Score = 49.3 bits (116), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 8 TLRQIATHKAGIFKPHIPGFTVLQLPEAMDVIQEKASELK 47
TL +IA KAGIFK +P FTV Q EAM V+ EKAS+L+
Sbjct: 196 TLAEIAAEKAGIFKSGVPAFTVAQPDEAMRVLNEKASKLE 235