BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3210.1
(235 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G28010.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 135 2e-36
AT1G63150.2 | Tetratricopeptide repeat (TPR)-like superfamily pr... 114 6e-29
AT1G63150.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 114 6e-29
AT2G06000.2 | Pentatricopeptide repeat (PPR) superfamily protein... 112 2e-28
AT2G06000.1 | Pentatricopeptide repeat (PPR) superfamily protein... 112 2e-28
>AT4G28010.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr4:13930379-13932493 FORWARD LENGTH=704 |
201606
Length = 704
Score = 135 bits (341), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 116/189 (61%), Gaps = 5/189 (2%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKM-RDG 59
MI G CK M+++A+ L+ +M+ P+ +YN LL+ CK L+ +L E+M RD
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 60 RLCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKE 119
PDVVS+NI+I+ LK+GD+++A+ LL M + GL PD T++ LIN+F KL + E
Sbjct: 560 NF--PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
Query: 120 AKNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILN 179
A + MV G PDA I DS+L I +GET + L+ K+ + +VLD +LT T+++
Sbjct: 618 AISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMD 677
Query: 180 SFYLCSDNP 188
Y+C+ +
Sbjct: 678 --YMCNSSA 684
Score = 97.1 bits (240), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 1/160 (0%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+I G C+ K ++ A EL ++MK G + + + L+ FCK K++ L++M+
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
L E D+V Y LI G+L K L ++L+RG P IT+ TLI F KL ++KEA
Sbjct: 243 L-EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLH 160
+ + M+ RG+ P+ + Y L++G G+TKE + LL+
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Score = 76.3 bits (186), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+I G C +D + L ++ G P ++ YN+L+ FCK +L+ ++ E M + R
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE-R 311
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
P+V +Y LI+ + G + A +LL M+++ +P+ +T+ +INK K + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
+++ M R PD Y+ LL G KG+ E LL+ + K+ D + S
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 181 FYLCSDN 187
LC +N
Sbjct: 432 HGLCKEN 438
Score = 72.8 bits (177), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Query: 7 KMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGRLCEPDV 66
+M+ A ++ M G +N LL C+N + LL +MR L PDV
Sbjct: 119 QMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLM-PDV 177
Query: 67 VSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEAKNLLKS 126
SYN +I + +L+ A EL +M G +T+ LI+ F K +M EA LK
Sbjct: 178 FSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKE 237
Query: 127 MVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEG 166
M GL D +Y SL+ G+ D GE L ++ + G
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Score = 68.6 bits (166), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 17/171 (9%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+I CK +D A + +MK G + Y SL+ FC +L+ + L +++ + R
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE-R 276
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
P ++YN LI K G L+ A E+ M++RG+ P+ T+ LI+ + + KEA
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDT 171
LL M+ + P+A Y+ ++N K+ K+G+V D
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIIN----------------KLCKDGLVADA 371
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 36/201 (17%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKM-RDG 59
+I+ LCK +V A E+V MK P ++ YN LL C L+ KLL M +D
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 60 RLCEPDVVSYN-----------------------------------ILINCILKSGDLQA 84
+PDV+SYN IL+N LK+GD+
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 85 AKELLADMLQRGLDPDRITFATLINKFSKLWEMKEAKNLLKSMVSRGLPPDAFIYDSLLN 144
A EL + + + T+ +I+ F K + AK LL M L P F Y+ LL+
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537
Query: 145 GYIDKGETKEFMTLLHKIAKE 165
+G + L ++ ++
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRD 558
>AT1G63150.2 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr1:23419399-23421288 FORWARD LENGTH=629 |
201606
Length = 629
Score = 114 bits (285), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 105/186 (56%), Gaps = 1/186 (0%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+I LCK + V++A +L +M+ G P + YNSL+ C + +LL M + +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
+ P+VV++N LI+ K G L A++L +M+QR +DPD IT+ LIN F + EA
Sbjct: 324 I-NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
K + K MVS+ P+ Y++L+NG+ ++ + L ++++ G+V +T +TI+
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 181 FYLCSD 186
F+ D
Sbjct: 443 FFQAGD 448
Score = 102 bits (253), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 114/214 (53%), Gaps = 1/214 (0%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+++GLCK +D+A L+++M+ + +N+++ CK R +EV L +M + +
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETK 287
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
P+VV+YN LINC+ G A LL++ML++ ++P+ +TF LI+ F K ++ EA
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
+ L + M+ R + PD Y+ L+NG+ E + + + + + + +T++N
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 181 FYLCSDNPEFIDLLPTFSPNTYIQKNISCSELLK 214
F C + ++L S + ++ + +++
Sbjct: 408 FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Score = 84.0 bits (206), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 11 VDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGRLCEPDVVSYN 70
VD A +L M P+ +E+N LL+ K K E+V L E+M+ + D+ +Y+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH-DLYTYS 122
Query: 71 ILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEAKNLLKSMVSR 130
I INC + L A +LA M++ G +PD +T ++L+N + + +A L+ MV
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 131 GLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
G PD F + +L++G + E + L+ ++ + G D T++N
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Score = 77.8 bits (190), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLL-AVFCKNRKLEVVQKLLEKMRDG 59
+++G C K + A LV QM G+ P + + +L+ +F N+ E V L+++M
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV-ALVDQMVQ- 216
Query: 60 RLCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKE 119
R C+PD+V+Y ++N + K GD+ A LL M + + + F T+I+ K ++
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 120 AKNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILN 179
A +L M ++G+ P+ Y+SL+N + G + LL + ++ + + + +++
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 180 SFY 182
+F+
Sbjct: 337 AFF 339
Score = 77.0 bits (188), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
++S + KM ++ L QM+ G Y+ + FC+ +L + +L KM
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
EPD+V+ + L+N S + A L+ M++ G PD TF TLI+ + EA
Sbjct: 149 Y-EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
L+ MV RG PD Y +++NG +G+ + LL+K+ + + + +TI++S
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Score = 76.6 bits (187), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 9/218 (4%)
Query: 14 AEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGRLCEPDVVSYNILI 73
AE+L +M P ++ YN L+ FC + +L+ +++ + M + C P++ +YN LI
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS-KDCLPNIQTYNTLI 405
Query: 74 NCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEAKNLLKSMVSRGLP 133
N K ++ EL +M QRGL + +T+ T+I F + + A+ + K MVS +P
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 134 PDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNSFYLCSDNPEFIDL 193
D Y LL+G G+ + + + K + L+ + +T++ E DL
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 194 LPTFSP-------NTYIQKNISCSELLKRLDKLYTGFK 224
+ S NT I + LL+ D L+ K
Sbjct: 526 FCSLSIKPDVVTYNTMIS-GLCSKRLLQEADDLFRKMK 562
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+I+G CK K V+ EL +M G + ++ Y +++ F + + Q + ++M R
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
+ D+++Y+IL++ + G L A + + + ++ + + T+I K ++ EA
Sbjct: 464 V-PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
+L S+ + PD Y+++++G K +E L K+ ++G + ++ +T++ +
Sbjct: 523 WDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 4/159 (2%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
++ GLC +D A + ++ YN+++ CK K+ L +
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS--- 530
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
+PDVV+YN +I+ + LQ A +L M + G P+ T+ TLI + + +
Sbjct: 531 -IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAAS 589
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLL 159
L+K M S G DA + N D K F+ +L
Sbjct: 590 AELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSFLNML 628
>AT1G63150.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr1:23419399-23421288 FORWARD LENGTH=629 |
201606
Length = 629
Score = 114 bits (285), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 105/186 (56%), Gaps = 1/186 (0%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+I LCK + V++A +L +M+ G P + YNSL+ C + +LL M + +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
+ P+VV++N LI+ K G L A++L +M+QR +DPD IT+ LIN F + EA
Sbjct: 324 I-NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
K + K MVS+ P+ Y++L+NG+ ++ + L ++++ G+V +T +TI+
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 181 FYLCSD 186
F+ D
Sbjct: 443 FFQAGD 448
Score = 102 bits (253), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 114/214 (53%), Gaps = 1/214 (0%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+++GLCK +D+A L+++M+ + +N+++ CK R +EV L +M + +
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETK 287
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
P+VV+YN LINC+ G A LL++ML++ ++P+ +TF LI+ F K ++ EA
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
+ L + M+ R + PD Y+ L+NG+ E + + + + + + +T++N
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 181 FYLCSDNPEFIDLLPTFSPNTYIQKNISCSELLK 214
F C + ++L S + ++ + +++
Sbjct: 408 FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Score = 84.0 bits (206), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 11 VDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGRLCEPDVVSYN 70
VD A +L M P+ +E+N LL+ K K E+V L E+M+ + D+ +Y+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH-DLYTYS 122
Query: 71 ILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEAKNLLKSMVSR 130
I INC + L A +LA M++ G +PD +T ++L+N + + +A L+ MV
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 131 GLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
G PD F + +L++G + E + L+ ++ + G D T++N
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Score = 77.8 bits (190), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLL-AVFCKNRKLEVVQKLLEKMRDG 59
+++G C K + A LV QM G+ P + + +L+ +F N+ E V L+++M
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV-ALVDQMVQ- 216
Query: 60 RLCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKE 119
R C+PD+V+Y ++N + K GD+ A LL M + + + F T+I+ K ++
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 120 AKNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILN 179
A +L M ++G+ P+ Y+SL+N + G + LL + ++ + + + +++
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 180 SFY 182
+F+
Sbjct: 337 AFF 339
Score = 77.0 bits (188), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
++S + KM ++ L QM+ G Y+ + FC+ +L + +L KM
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
EPD+V+ + L+N S + A L+ M++ G PD TF TLI+ + EA
Sbjct: 149 Y-EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
L+ MV RG PD Y +++NG +G+ + LL+K+ + + + +TI++S
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Score = 76.6 bits (187), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 9/218 (4%)
Query: 14 AEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGRLCEPDVVSYNILI 73
AE+L +M P ++ YN L+ FC + +L+ +++ + M + C P++ +YN LI
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS-KDCLPNIQTYNTLI 405
Query: 74 NCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEAKNLLKSMVSRGLP 133
N K ++ EL +M QRGL + +T+ T+I F + + A+ + K MVS +P
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 134 PDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNSFYLCSDNPEFIDL 193
D Y LL+G G+ + + + K + L+ + +T++ E DL
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 194 LPTFSP-------NTYIQKNISCSELLKRLDKLYTGFK 224
+ S NT I + LL+ D L+ K
Sbjct: 526 FCSLSIKPDVVTYNTMIS-GLCSKRLLQEADDLFRKMK 562
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+I+G CK K V+ EL +M G + ++ Y +++ F + + Q + ++M R
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
+ D+++Y+IL++ + G L A + + + ++ + + T+I K ++ EA
Sbjct: 464 V-PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
+L S+ + PD Y+++++G K +E L K+ ++G + ++ +T++ +
Sbjct: 523 WDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 4/159 (2%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
++ GLC +D A + ++ YN+++ CK K+ L +
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS--- 530
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
+PDVV+YN +I+ + LQ A +L M + G P+ T+ TLI + + +
Sbjct: 531 -IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAAS 589
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLL 159
L+K M S G DA + N D K F+ +L
Sbjct: 590 AELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSFLNML 628
>AT2G06000.2 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr2:2328000-2329610 REVERSE LENGTH=536 | 201606
Length = 536
Score = 112 bits (281), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+I GLC + + A EL+ M G P + YN+L+ FCK+ +L ++ + ++ G
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
+C PDVV+Y +I+ K+G ++ A LL DML+ G+ P +TF L++ ++K EM A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
+ + M+S G PD + SL++GY G+ + L ++ G+ + S ++N+
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 181 FYLCSDN 187
LC++N
Sbjct: 392 --LCNEN 396
Score = 79.0 bits (193), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
MISG CK + A L+ M G PT++ +N L+ + K ++ +++ KM
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
C PDVV++ LI+ + G + L +M RG+ P+ T++ LIN + +A
Sbjct: 343 -CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTIL 178
+ LL + S+ + P F+Y+ +++G+ G+ E ++ ++ K+ D K+T TIL
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD-KITFTIL 458
Score = 74.7 bits (182), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 15/189 (7%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+I G C++ V L +M G P + Y+ L+ C +L ++LL G+
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL-----GQ 407
Query: 61 LCEPDVVS----YNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWE 116
L D++ YN +I+ K+G + A ++ +M ++ PD+ITF LI
Sbjct: 408 LASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGR 467
Query: 117 MKEAKNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEG-----VVLDT 171
M EA ++ MV+ G PD SLL+ + G KE L++IA++G V L+T
Sbjct: 468 MFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNVVPLET 526
Query: 172 KLTSTILNS 180
K + L +
Sbjct: 527 KTANATLAA 535
Score = 73.2 bits (178), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
++ G K + AEE+ +M G P + + SL+ +C+ ++ +L E+M + R
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM-NAR 376
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
P+ +Y+ILIN + L A+ELL + + + P + +I+ F K ++ EA
Sbjct: 377 GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILN 179
+++ M + PD + L+ G+ KG E +++ HK+ G D S++L+
Sbjct: 437 NVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Score = 67.0 bits (162), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 34 NSLLAVFCKNRKLEVVQKLLEKMRDGRLCEPDVVSYNILINCILKSGDLQAAKELLADML 93
NSLL K ++E KL ++ + C D ++NILI + G + A ELL M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 94 QRGLDPDRITFATLINKFSKLWEMKEAKNLLKSMVSRGL-PPDAFIYDSLLNGYIDKGET 152
G +PD +T+ TLI F K E+ +A + K + S + PD Y S+++GY G+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 153 KEFMTLLHKIAKEGVVLDTKLTSTILNSFY 182
+E +LL + + G + T +T +L Y
Sbjct: 294 REASSLLDDMLRLG-IYPTNVTFNVLVDGY 322
>AT2G06000.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr2:2328000-2329610 REVERSE LENGTH=536 | 201606
Length = 536
Score = 112 bits (281), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+I GLC + + A EL+ M G P + YN+L+ FCK+ +L ++ + ++ G
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
+C PDVV+Y +I+ K+G ++ A LL DML+ G+ P +TF L++ ++K EM A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILNS 180
+ + M+S G PD + SL++GY G+ + L ++ G+ + S ++N+
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 181 FYLCSDN 187
LC++N
Sbjct: 392 --LCNEN 396
Score = 79.0 bits (193), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
MISG CK + A L+ M G PT++ +N L+ + K ++ +++ KM
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
C PDVV++ LI+ + G + L +M RG+ P+ T++ LIN + +A
Sbjct: 343 -CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTIL 178
+ LL + S+ + P F+Y+ +++G+ G+ E ++ ++ K+ D K+T TIL
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD-KITFTIL 458
Score = 74.7 bits (182), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 15/189 (7%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
+I G C++ V L +M G P + Y+ L+ C +L ++LL G+
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL-----GQ 407
Query: 61 LCEPDVVS----YNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWE 116
L D++ YN +I+ K+G + A ++ +M ++ PD+ITF LI
Sbjct: 408 LASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGR 467
Query: 117 MKEAKNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEG-----VVLDT 171
M EA ++ MV+ G PD SLL+ + G KE L++IA++G V L+T
Sbjct: 468 MFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNVVPLET 526
Query: 172 KLTSTILNS 180
K + L +
Sbjct: 527 KTANATLAA 535
Score = 73.2 bits (178), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Query: 1 MISGLCKMKMVDIAEELVHQMKCHGHIPTSLEYNSLLAVFCKNRKLEVVQKLLEKMRDGR 60
++ G K + AEE+ +M G P + + SL+ +C+ ++ +L E+M + R
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM-NAR 376
Query: 61 LCEPDVVSYNILINCILKSGDLQAAKELLADMLQRGLDPDRITFATLINKFSKLWEMKEA 120
P+ +Y+ILIN + L A+ELL + + + P + +I+ F K ++ EA
Sbjct: 377 GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 121 KNLLKSMVSRGLPPDAFIYDSLLNGYIDKGETKEFMTLLHKIAKEGVVLDTKLTSTILN 179
+++ M + PD + L+ G+ KG E +++ HK+ G D S++L+
Sbjct: 437 NVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Score = 67.0 bits (162), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 34 NSLLAVFCKNRKLEVVQKLLEKMRDGRLCEPDVVSYNILINCILKSGDLQAAKELLADML 93
NSLL K ++E KL ++ + C D ++NILI + G + A ELL M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 94 QRGLDPDRITFATLINKFSKLWEMKEAKNLLKSMVSRGL-PPDAFIYDSLLNGYIDKGET 152
G +PD +T+ TLI F K E+ +A + K + S + PD Y S+++GY G+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 153 KEFMTLLHKIAKEGVVLDTKLTSTILNSFY 182
+E +LL + + G + T +T +L Y
Sbjct: 294 REASSLLDDMLRLG-IYPTNVTFNVLVDGY 322