BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3250.1
(480 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 254 1e-74
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 254 1e-74
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 83 8e-18
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 49 1e-06
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 254 bits (649), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 226/432 (52%), Gaps = 47/432 (10%)
Query: 36 FQSKIDKDGNVKVFKTRLVAKGYKQIQSIDYDETFSPIAMLKSIRIILGIAAHYDYEIWQ 95
++ K + DG ++ +K RLVAKGY Q + ID+ ETFSP+ L S+++IL I+A Y++ + Q
Sbjct: 133 YKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQ 192
Query: 96 MDVKTAFLNGYLEEDVYMTHPEGFV----DSKNAGKVCKLNKSIYGLKQASRSWNLRFDE 151
+D+ AFLNG L+E++YM P G+ DS VC L KSIYGLKQASR W L+F
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252
Query: 152 KIKEFGFLKNAEESFIYKKVIGSNLVFLVLYVDDILIIGNNIPMLESIKDGLRKCFSMKD 211
+ FGF+++ + + K+ + + +++YVDDI+I NN ++ +K L+ CF ++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 212 LGEAEYILGIKIYRDRSRRMIGLSQETYIDKILQRFEVTNSKRGFLPMIHGIVLSKDQCP 271
LG +Y LG++I RS I + Q Y +L + K +PM + S
Sbjct: 313 LGPLKYFLGLEI--ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGG 370
Query: 272 MSPDELAHMMKIPYASAIGSIMYTMICTRPDVSYTLSKCSRYQSNPGEAHWCAAKNIL-- 329
D A Y IG +MY I TR D+S+ ++K S++ P AH A IL
Sbjct: 371 DFVDAKA------YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHY 423
Query: 330 ------------------------------KDDFKSQSGYVYFLNGGAVSWKSSKQSTIA 359
KD +S +GY FL +SWKS KQ ++
Sbjct: 424 IKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVS 483
Query: 360 DSTTEAEYLTASEAAKEGVWIKKFMIELGVVPGIEEGVTLYCDNSGAIAQAKEPRAHQKS 419
S+ EAEY S A E +W+ +F EL + + + L+CDN+ AI A H+++
Sbjct: 484 KSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERT 541
Query: 420 KHIQRKYHLIRE 431
KHI+ H +RE
Sbjct: 542 KHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 254 bits (649), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 226/432 (52%), Gaps = 47/432 (10%)
Query: 36 FQSKIDKDGNVKVFKTRLVAKGYKQIQSIDYDETFSPIAMLKSIRIILGIAAHYDYEIWQ 95
++ K + DG ++ +K RLVAKGY Q + ID+ ETFSP+ L S+++IL I+A Y++ + Q
Sbjct: 133 YKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQ 192
Query: 96 MDVKTAFLNGYLEEDVYMTHPEGFV----DSKNAGKVCKLNKSIYGLKQASRSWNLRFDE 151
+D+ AFLNG L+E++YM P G+ DS VC L KSIYGLKQASR W L+F
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252
Query: 152 KIKEFGFLKNAEESFIYKKVIGSNLVFLVLYVDDILIIGNNIPMLESIKDGLRKCFSMKD 211
+ FGF+++ + + K+ + + +++YVDDI+I NN ++ +K L+ CF ++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 212 LGEAEYILGIKIYRDRSRRMIGLSQETYIDKILQRFEVTNSKRGFLPMIHGIVLSKDQCP 271
LG +Y LG++I RS I + Q Y +L + K +PM + S
Sbjct: 313 LGPLKYFLGLEI--ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGG 370
Query: 272 MSPDELAHMMKIPYASAIGSIMYTMICTRPDVSYTLSKCSRYQSNPGEAHWCAAKNIL-- 329
D A Y IG +MY I TR D+S+ ++K S++ P AH A IL
Sbjct: 371 DFVDAKA------YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHY 423
Query: 330 ------------------------------KDDFKSQSGYVYFLNGGAVSWKSSKQSTIA 359
KD +S +GY FL +SWKS KQ ++
Sbjct: 424 IKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVS 483
Query: 360 DSTTEAEYLTASEAAKEGVWIKKFMIELGVVPGIEEGVTLYCDNSGAIAQAKEPRAHQKS 419
S+ EAEY S A E +W+ +F EL + + + L+CDN+ AI A H+++
Sbjct: 484 KSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERT 541
Query: 420 KHIQRKYHLIRE 431
KHI+ H +RE
Sbjct: 542 KHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 83.2 bits (204), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 50/239 (20%)
Query: 177 VFLVLYVDDILIIGNNIPMLESIKDGLRKCFSMKDLGEAEYILGIKIYRDRSRRMIGLSQ 236
++L+LYVDDIL+ G++ +L + L FSMKDLG Y LGI+I S + LSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 237 ETYIDKILQRFEVTNSKRGFLPMIHGIVLSKDQCPMSPDELAHMMKIP----YASAIGSI 292
Y ++IL + + K P+ P+ + K P + S +G++
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPL-----------PLKLNSSVSTAKYPDPSDFRSIVGAL 107
Query: 293 MYTMICTRPDVSYTLSKCSRYQSNPGEAHWCAAKNILK---------------------- 330
Y + TRPD+SY ++ + P A + K +L+
Sbjct: 108 QY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQA 166
Query: 331 ----------DDFKSQSGYVYFLNGGAVSWKSSKQSTIADSTTEAEYLTASEAAKEGVW 379
+S +G+ FL +SW + +Q T++ S+TE EY + A E W
Sbjct: 167 FCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 36 FQSKIDKDGNVKVFKTRLVAKGYKQIQSIDYDETFSPIAMLKSIRIILGIAAHYD 90
F++K+ DG + K RLVAKG+ Q + I + ET+SP+ +IR IL +A +
Sbjct: 75 FKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLE 129