BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3310.1
(409 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 241 7e-71
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 241 7e-71
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 172 3e-51
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 98 9e-25
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 241 bits (615), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 119/251 (47%), Positives = 159/251 (63%), Gaps = 3/251 (1%)
Query: 149 GIFLCQRKYALDILKDSGLTAARPSKFPMDQKLRLSPTDGIPLKDPSVYRRLIGRLLYLT 208
GI +CQRKYALD+L ++GL +PS PMD + S G D YRRLIGRL+YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 209 VTRPDITFAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFLSAKSSLHITGYCDSD 268
+TR DI+FAVN LSQF + P H A ++L Y+KGT+ +G+F S+++ + + + D+
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 269 WAGCPSTRRSTTGYFTMMGDSPLSWKSKKQPTVAKSFAEAEYRALAILTCELQWLKYLLL 328
+ C TRRST GY +G S +SWKSKKQ V+KS AEAEYRAL+ T E+ WL
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 329 DFGIDHTDPMTVYCDNRAALHIADNLVFHERTKHIEIDCHIVHEK-IKDNVIATRFITSD 387
+ + + P ++CDN AA+HIA N VFHERTKHIE DCH V E+ + ++ F D
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYD 569
Query: 388 NQLADIFTKPL 398
Q D FT+ L
Sbjct: 570 EQ--DGFTEYL 578
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 241 bits (615), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 119/251 (47%), Positives = 159/251 (63%), Gaps = 3/251 (1%)
Query: 149 GIFLCQRKYALDILKDSGLTAARPSKFPMDQKLRLSPTDGIPLKDPSVYRRLIGRLLYLT 208
GI +CQRKYALD+L ++GL +PS PMD + S G D YRRLIGRL+YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 209 VTRPDITFAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFLSAKSSLHITGYCDSD 268
+TR DI+FAVN LSQF + P H A ++L Y+KGT+ +G+F S+++ + + + D+
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 269 WAGCPSTRRSTTGYFTMMGDSPLSWKSKKQPTVAKSFAEAEYRALAILTCELQWLKYLLL 328
+ C TRRST GY +G S +SWKSKKQ V+KS AEAEYRAL+ T E+ WL
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 329 DFGIDHTDPMTVYCDNRAALHIADNLVFHERTKHIEIDCHIVHEK-IKDNVIATRFITSD 387
+ + + P ++CDN AA+HIA N VFHERTKHIE DCH V E+ + ++ F D
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYD 569
Query: 388 NQLADIFTKPL 398
Q D FT+ L
Sbjct: 570 EQ--DGFTEYL 578
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 172 bits (436), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 149 GIFLCQRKYALDILKDSGLTAARPSKFPMDQKLRLSPTDGIPLKDPSVYRRLIGRLLYLT 208
G+FL Q KYA IL ++G+ +P P+ KL S DPS +R ++G L YLT
Sbjct: 53 GLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLT 111
Query: 209 VTRPDITFAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFLSAKSSLHITGYCDSD 268
+TRPDI++AVN + Q M P+ D RVLRY+KGT+ G+++ S L++ +CDSD
Sbjct: 112 LTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171
Query: 269 WAGCPSTRRSTTGYFTMMGDSPLSWKSKKQPTVAKSFAEAEYRALAILTCELQW 322
WAGC STRRSTTG+ T +G + +SW +K+QPTV++S E EYRALA+ EL W
Sbjct: 172 WAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 98.2 bits (243), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%)
Query: 205 LYLTVTRPDITFAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFLSAKSSLHITGY 264
+YLT+TRPD+TFAVN LSQF + A ++VL Y+KGT+ +G+F SA S L + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 265 CDSDWAGCPSTRRSTTGYFTMM 286
DSDWA CP TRRS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82