BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3340.1
(437 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 242 5e-71
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 242 5e-71
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 77 2e-16
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 242 bits (618), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 226 RPIGCKWVYKIKFNSDGSIERYKARLVAKGYTQIEGLDYNDTFAPVVKLVTVRVLLSIAA 285
+PIGCKWVYKIK+NSDG+IERYKARLVAKGYTQ EG+D+ +TF+PV KL +V+++L+I+A
Sbjct: 125 KPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISA 184
Query: 286 VKGWSLHQLDVNNAFLQGDLHEEVYMKLPPGFSS-QGES----KVCRLHKSLYGLKQATR 340
+ ++LHQLD++NAFL GDL EE+YMKLPPG+++ QG+S VC L KS+YGLKQA+R
Sbjct: 185 IYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASR 244
Query: 341 QWFSKFSSVLIERVFSQSKSDYSLFTFRSHSTQIFVLVYVDDIIITGNNDSAISKLKLFL 400
QWF KFS LI F QS SD++ F + + + VLVYVDDIII NND+A+ +LK L
Sbjct: 245 QWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQL 304
Query: 401 NKSFSLKDLGRLQYSVSKYLAHRKA 425
F L+DLG L+Y + +A A
Sbjct: 305 KSCFKLRDLGPLKYFLGLEIARSAA 329
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 242 bits (618), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 226 RPIGCKWVYKIKFNSDGSIERYKARLVAKGYTQIEGLDYNDTFAPVVKLVTVRVLLSIAA 285
+PIGCKWVYKIK+NSDG+IERYKARLVAKGYTQ EG+D+ +TF+PV KL +V+++L+I+A
Sbjct: 125 KPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISA 184
Query: 286 VKGWSLHQLDVNNAFLQGDLHEEVYMKLPPGFSS-QGES----KVCRLHKSLYGLKQATR 340
+ ++LHQLD++NAFL GDL EE+YMKLPPG+++ QG+S VC L KS+YGLKQA+R
Sbjct: 185 IYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASR 244
Query: 341 QWFSKFSSVLIERVFSQSKSDYSLFTFRSHSTQIFVLVYVDDIIITGNNDSAISKLKLFL 400
QWF KFS LI F QS SD++ F + + + VLVYVDDIII NND+A+ +LK L
Sbjct: 245 QWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQL 304
Query: 401 NKSFSLKDLGRLQYSVSKYLAHRKA 425
F L+DLG L+Y + +A A
Sbjct: 305 KSCFKLRDLGPLKYFLGLEIARSAA 329
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 77.0 bits (188), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Query: 184 SLSDSPPTEAISEQLVEISGCPTRSRRPPSHLDDYVCSNTSSRPIGCKWVYKIKFNSDGS 243
+L D +A+ E+L +S T PP + +GCKWV+K K +SDG+
Sbjct: 34 ALKDPGWCQAMQEELDALSRNKTWILVPPP---------VNQNILGCKWVFKTKLHSDGT 84
Query: 244 IERYKARLVAKGYTQIEGLDYNDTFAPVVKLVTVRVLLSIA 284
++R KARLVAKG+ Q EG+ + +T++PVV+ T+R +L++A
Sbjct: 85 LDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125