BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3350.1
(243 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 213 3e-63
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 213 3e-63
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 152 2e-45
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 99 3e-26
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 213 bits (542), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 148/246 (60%), Gaps = 6/246 (2%)
Query: 1 MDQKLRLSPTDGIPLKDPSVYRRLIGRLLYLTVTRPDITFAVNNLSQFMQTPSQVHLDAA 60
MD + S G D YRRLIGRL+YL +TR DI+FAVN LSQF + P H A
Sbjct: 358 MDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417
Query: 61 HRVLQYLKGTLDKGIFLSAKSSLHITGYCDSDWAGCPSTRRSTTGYFTMMGDSPLSWKSK 120
++L Y+KGT+ +G+F S+++ + + + D+ + C TRRST GY +G S +SWKSK
Sbjct: 418 MKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSK 477
Query: 121 KQPTVAKSSAEAEYRALAILTCELQWFKYLLLDFRIDHTDPMTVYCDNRAALHIADNPVF 180
KQ V+KSSAEAEYRAL+ T E+ W + ++ + P ++CDN AA+HIA N VF
Sbjct: 478 KQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVF 537
Query: 181 HERTKHIEIDCHIVRE-NIKDNVIATRFITSDNQLADIFTK---PLGAEPFKNIVGKLGV 236
HERTKHIE DCH VRE ++ ++ F D Q D FT+ P+ IV G+
Sbjct: 538 HERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFGL 595
Query: 237 TSIPAL 242
+ AL
Sbjct: 596 AGLEAL 601
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 213 bits (542), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 148/246 (60%), Gaps = 6/246 (2%)
Query: 1 MDQKLRLSPTDGIPLKDPSVYRRLIGRLLYLTVTRPDITFAVNNLSQFMQTPSQVHLDAA 60
MD + S G D YRRLIGRL+YL +TR DI+FAVN LSQF + P H A
Sbjct: 358 MDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417
Query: 61 HRVLQYLKGTLDKGIFLSAKSSLHITGYCDSDWAGCPSTRRSTTGYFTMMGDSPLSWKSK 120
++L Y+KGT+ +G+F S+++ + + + D+ + C TRRST GY +G S +SWKSK
Sbjct: 418 MKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSK 477
Query: 121 KQPTVAKSSAEAEYRALAILTCELQWFKYLLLDFRIDHTDPMTVYCDNRAALHIADNPVF 180
KQ V+KSSAEAEYRAL+ T E+ W + ++ + P ++CDN AA+HIA N VF
Sbjct: 478 KQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVF 537
Query: 181 HERTKHIEIDCHIVRE-NIKDNVIATRFITSDNQLADIFTK---PLGAEPFKNIVGKLGV 236
HERTKHIE DCH VRE ++ ++ F D Q D FT+ P+ IV G+
Sbjct: 538 HERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFGL 595
Query: 237 TSIPAL 242
+ AL
Sbjct: 596 AGLEAL 601
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 152 bits (384), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 94/130 (72%)
Query: 17 DPSVYRRLIGRLLYLTVTRPDITFAVNNLSQFMQTPSQVHLDAAHRVLQYLKGTLDKGIF 76
DPS +R ++G L YLT+TRPDI++AVN + Q M P+ D RVL+Y+KGT+ G++
Sbjct: 96 DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155
Query: 77 LSAKSSLHITGYCDSDWAGCPSTRRSTTGYFTMMGDSPLSWKSKKQPTVAKSSAEAEYRA 136
+ S L++ +CDSDWAGC STRRSTTG+ T +G + +SW +K+QPTV++SS E EYRA
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215
Query: 137 LAILTCELQW 146
LA+ EL W
Sbjct: 216 LALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 99.0 bits (245), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%)
Query: 29 LYLTVTRPDITFAVNNLSQFMQTPSQVHLDAAHRVLQYLKGTLDKGIFLSAKSSLHITGY 88
+YLT+TRPD+TFAVN LSQF + A ++VL Y+KGT+ +G+F SA S L + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 89 CDSDWAGCPSTRRSTTGYFTMM 110
DSDWA CP TRRS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82