BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3550.1
(126 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 53 5e-09
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 53 5e-09
AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 50 3e-08
AT2G33160.1 | glycoside hydrolase family 28 protein / polygalact... 51 4e-08
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 53.1 bits (126), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 2 NVDASFTKATDPTGIGCIIRDEESKFIIATANSV-RCQNAEECEGLAILSSMQWAL---- 56
N DA++ GIG I+R+E + A ++ R +N E E L +++WA+
Sbjct: 148 NTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAE----LEALRWAVLTMS 203
Query: 57 QLNITHAHIESDNQALVNFINGQNIGLQWQSLK-IIQQIRSLIDNFEGIMFTCVPRDCNA 115
+ N ESD QALVN +N + W +L+ ++ I+ L+ +FE + F PR N
Sbjct: 204 RFNYKRIIFESDAQALVNLLNSDDF---WPTLQPALEDIQQLLHHFEEVKFEFTPRGGNK 260
Query: 116 PA 117
A
Sbjct: 261 VA 262
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 53.1 bits (126), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 13/122 (10%)
Query: 2 NVDASFTKATDPTGIGCIIRDEESKFIIATANSV-RCQNAEECEGLAILSSMQWAL---- 56
N DA++ + + GIG ++R+E+ + A ++ + ++ E E L +M+WA+
Sbjct: 431 NTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAE----LEAMRWAVLSLS 486
Query: 57 QLNITHAHIESDNQALVNFINGQNIGLQWQSLK-IIQQIRSLIDNFEGIMFTCVPRDCNA 115
+ + ESD+Q L+ +N I W SLK IQ ++ L+ F + F +PR+ N
Sbjct: 487 RFQYNYVIFESDSQVLIEILNNDEI---WPSLKPTIQDLQRLLSQFTEVKFVFIPREGNT 543
Query: 116 PA 117
A
Sbjct: 544 LA 545
>AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:9706657-9707298 REVERSE
LENGTH=213 | 201606
Length = 213
Score = 50.4 bits (119), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 3/117 (2%)
Query: 2 NVDASFTKATDPTGIGCIIRDEESKFIIA-TANSVRCQNAEECEGLAILSSMQWALQLNI 60
N D SF + G ++RD +++A A + NA E E A++ SMQ
Sbjct: 63 NFDGSFVNGDVKSKAGWVVRDSNGSYLLAGQAIGRKVDNALESEIQALIISMQHCWSHGY 122
Query: 61 THAHIESDNQALVNFINGQNIGLQWQSLKIIQQIRSLIDNFEGIMFTCVPRDCNAPA 117
E DN+ L + ING + + I+ I + FE I F + R N PA
Sbjct: 123 KRVCFEGDNKMLFDLINGSKVYFGVHNW--IRDIHWWLRKFESIHFNWIRRHHNTPA 177
>AT2G33160.1 | glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein |
Chr2:14053404-14056246 FORWARD LENGTH=664 | 201606
Length = 664
Score = 50.8 bits (120), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Query: 2 NVDASFTKATDPTGIGCIIRDEESKFIIATANSVRC-QNAEECEGLAILSSMQWALQLNI 60
NVD SF P G I+RD ++ A C NA ECE A+L +MQ
Sbjct: 514 NVDGSFINGNIPGKGGWIVRDHNGRYEFAGQAIGNCIDNALECEFQALLMAMQHCWSKGY 573
Query: 61 THAHIESDNQALVNFINGQNIGLQWQSLKIIQQIRSLIDNFEGIMFTCVPRDCNAPA 117
E DN+ + + ING + + + + I+ I FE F R N PA
Sbjct: 574 RRICFEGDNKEMFDLING--LKMHFGAFNWIRDILWWASKFEQTQFQWTNRQNNKPA 628