BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3750.1
(575 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G45290.1 | RING/U-box superfamily protein | Chr5:18350011-183... 318 e-101
AT5G45290.2 | RING/U-box superfamily protein | Chr5:18350011-183... 313 1e-99
AT1G35625.1 | RING/U-box superfamily protein | Chr1:13158466-131... 72 2e-13
AT1G21960.1 | RING/U-box superfamily protein | Chr1:7725972-7726... 67 2e-12
AT1G14200.1 | RING/U-box superfamily protein | Chr1:4854532-4855... 66 3e-12
>AT5G45290.1 | RING/U-box superfamily protein |
Chr5:18350011-18352092 REVERSE LENGTH=545 | 201606
Length = 545
Score = 318 bits (814), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/451 (48%), Positives = 279/451 (61%), Gaps = 66/451 (14%)
Query: 134 GRSRSRFSFFPGNVSFRLRRAASLGSSSAYSLLPNGLTVSNIEEGFAINTGSTNTLSNGN 193
GR S F F PGN+S RL RA+S + S NT +
Sbjct: 150 GRVFSHFKFIPGNISSRLSRASS--------------------------SRSFNTTYPVS 183
Query: 194 GPHLDAGVPSVSDINRLPGCQYEDTTSSELQLEQPVSRLPLNLRDNEITSSRNVVRSNEN 253
H + GV S S E ++E P R+P+ NVVR +
Sbjct: 184 SSHREDGVTSPS----------ESAIRLNDRVESP--RIPV---------IDNVVRDIDA 222
Query: 254 VGFPADLNVQMSRNLTAIETNESRQLERQVRAREP-IERSVSFGRTLSVGRLRDRVLRRS 312
+ F D +++ R + +++ + L+R+ REP IER+V F RTLSVGRLRDRVLRRS
Sbjct: 223 MRFGEDGSLRSPRVVNGMDSTYAGLLDRRHVVREPSIERNVRFSRTLSVGRLRDRVLRRS 282
Query: 313 LLSDALV----GQLQEDREMRDSSQDNMQQFRDDLTRSSDLNENVTQASSIELNSMYSGQ 368
LSD Q +ED ++ S + +T +S LN + ASSI +++ Q
Sbjct: 283 SLSDFAFRPSPHQGEEDTDL--FSAETAAAEDAPVTSTSILNRS---ASSIR-RTLFGIQ 336
Query: 369 EYDLVNLRSRETRYHDIMEHRTDFLERRRRIRSQVRALQRLGSRFENLS-GHERSCISSG 427
+++ RE RY ++EHR+DFLERRRRIRSQVRALQRLGSRFEN++ H+RSC+ SG
Sbjct: 337 DHETPAALVREGRYQGLLEHRSDFLERRRRIRSQVRALQRLGSRFENVAVHHDRSCVLSG 396
Query: 428 QHRMGRCTCR-TSNR--VINPDDDTTARASISRIIMLAEALFEVLDEIHQQSVLLSS-RP 483
Q + GRCTCR +NR D+T ARASISRI++LAEALFEVLDEIHQQSV+LSS +P
Sbjct: 397 QDQAGRCTCRAVTNRGSTTATTDETNARASISRIVLLAEALFEVLDEIHQQSVVLSSQQP 456
Query: 484 SVSSIGSVPAPKEVVESMPVKIYTKPEKHQNEDPAQCYICLLEYGEGDCMRILPCRHEFH 543
SVSSIGSVPAP +VV+ +P+K+YTK Q+EDP+QCYICL+EY E D +R LPC HEFH
Sbjct: 457 SVSSIGSVPAPNDVVDLLPIKLYTKS---QSEDPSQCYICLVEYEEADSIRTLPCHHEFH 513
Query: 544 QMCVDKWLKEIHRVCPLCRGDVCKSDSSAAQ 574
+ CVDKWLKEIHRVCPLCRGD+C+ D S+ Q
Sbjct: 514 KTCVDKWLKEIHRVCPLCRGDICRHDPSSEQ 544
>AT5G45290.2 | RING/U-box superfamily protein |
Chr5:18350011-18352092 REVERSE LENGTH=546 | 201606
Length = 546
Score = 313 bits (802), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 217/452 (48%), Positives = 279/452 (61%), Gaps = 67/452 (14%)
Query: 134 GRSRSRFSFFPGNVSFRLRRAASLGSSSAYSLLPNGLTVSNIEEGFAINTGSTNTLSNGN 193
GR S F F PGN+S RL RA+S + S NT +
Sbjct: 150 GRVFSHFKFIPGNISSRLSRASS--------------------------SRSFNTTYPVS 183
Query: 194 GPHLDAGVPSVSDINRLPGCQYEDTTSSELQLEQPVSRLPLNLRDNEITSSRNVVRSNEN 253
H + GV S S E ++E P R+P+ NVVR +
Sbjct: 184 SSHREDGVTSPS----------ESAIRLNDRVESP--RIPV---------IDNVVRDIDA 222
Query: 254 VGFPADLNVQMSRNLTAIETNESRQLERQVRAREP-IERSVSFGRTLSVGRLRDRVLRRS 312
+ F D +++ R + +++ + L+R+ REP IER+V F RTLSVGRLRDRVLRRS
Sbjct: 223 MRFGEDGSLRSPRVVNGMDSTYAGLLDRRHVVREPSIERNVRFSRTLSVGRLRDRVLRRS 282
Query: 313 LLSDALV----GQLQEDREMRDSSQDNMQQFRDDLTRSSDLNENVTQASSIELNSMYSGQ 368
LSD Q +ED ++ S + +T +S LN + ASSI +++ Q
Sbjct: 283 SLSDFAFRPSPHQGEEDTDL--FSAETAAAEDAPVTSTSILNRS---ASSIR-RTLFGIQ 336
Query: 369 EYDLVNLRSRETRYHDIMEHRTDFLERRRRIRSQVRALQRLGSRFENLS-GHERSCISSG 427
+++ RE RY ++EHR+DFLERRRRIRSQVRALQRLGSRFEN++ H+RSC+ SG
Sbjct: 337 DHETPAALVREGRYQGLLEHRSDFLERRRRIRSQVRALQRLGSRFENVAVHHDRSCVLSG 396
Query: 428 QHRMGRCTCR-TSNR--VINPDDDTTARASISRIIMLAEALFEVLDEIHQQSVLLSS-RP 483
Q + GRCTCR +NR D+T ARASISRI++LAEALFEVLDEIHQQSV+LSS +P
Sbjct: 397 QDQAGRCTCRAVTNRGSTTATTDETNARASISRIVLLAEALFEVLDEIHQQSVVLSSQQP 456
Query: 484 SVSSIGSVPAPKEVVESMPVKIYTKPEKHQNEDPAQCYICLLEYGEGDCMRILPCRHEFH 543
SVSSIGSVPAP +VV+ +P+K+YTK Q+EDP+QCYICL+EY E D +R LPC HEFH
Sbjct: 457 SVSSIGSVPAPNDVVDLLPIKLYTKS---QSEDPSQCYICLVEYEEADSIRTLPCHHEFH 513
Query: 544 QMCVDKWLKEIH-RVCPLCRGDVCKSDSSAAQ 574
+ CVDKWLKEIH RVCPLCRGD+C+ D S+ Q
Sbjct: 514 KTCVDKWLKEIHSRVCPLCRGDICRHDPSSEQ 545
>AT1G35625.1 | RING/U-box superfamily protein |
Chr1:13158466-13160151 REVERSE LENGTH=318 | 201606
Length = 318
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 494 PKEVVESMPVKIYTKPEKHQNEDPAQCYICLLEYGEGDCMRILPCRHEFHQMCVDKWLKE 553
PK++++SMP ++YT + + C IC+ +Y G+ +RILPC+H++H +C+D WL
Sbjct: 208 PKDLLQSMPTEVYTGVLE-EGSTSVTCAICIDDYRVGEILRILPCKHKYHAVCIDSWLGR 266
Query: 554 IHRVCPLCR 562
CP+C+
Sbjct: 267 CRSFCPVCK 275
>AT1G21960.1 | RING/U-box superfamily protein | Chr1:7725972-7726586
FORWARD LENGTH=204 | 201606
Length = 204
Score = 66.6 bits (161), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 492 PAPKEVVESMPVKIYTKPEKHQNEDPAQCYICLLEYGEGDCMRILPCRHEFHQMCVDKWL 551
PA K VV+ + K+Y K +K N D + C ICL E+ +G+ + LPC HEF C+ KW
Sbjct: 131 PANKLVVDRLARKVYNK-KKKSNSDASVCTICLEEFEKGEIVVTLPCGHEFDDGCIGKWF 189
Query: 552 KEIHRVCPLCRGDV 565
+ H VCPLCR ++
Sbjct: 190 LKDH-VCPLCRFEL 202
>AT1G14200.1 | RING/U-box superfamily protein | Chr1:4854532-4855071
REVERSE LENGTH=179 | 201606
Length = 179
Score = 65.9 bits (159), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 470 DEIHQQSVLLSSRPSVSSI-------GSVPAPKEVVESMP-VKIYTKPEKHQNEDPAQCY 521
D + + V++ SR + G PA K VE+MP V I EK+ C
Sbjct: 55 DPLSPRFVMIGSRSGLDDFFSDGGKQGRSPALKSEVENMPRVVIGEDKEKYG----GSCA 110
Query: 522 ICLLEYGEGDCMRILPCRHEFHQMCVDKWLKEIHRVCPLCR 562
ICL E+ +GD +PC+H+FH CV++WL H CP+CR
Sbjct: 111 ICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGR-HATCPMCR 150