BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000091.1_g0010.1
(242 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 3e-47
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 3e-47
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 91 2e-22
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (424), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 103/162 (63%), Gaps = 18/162 (11%)
Query: 81 WINAMNEEYKSMQDNQVWDLVPLPEGKKPIGCKWIFTSKRDSKGNVERYKARLVAKGFTQ 140
W AM++E +M+ W++ LP KKPIGCKW++ K +S G +ERYKARLVAKG+TQ
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157
Query: 141 KEGVYHKETFSPVSLKDSFRIIMPLVAHFDPELHQMDVKTAFLNGDIDETIYM------- 193
+EG+ ETFSPV S ++I+ + A ++ LHQ+D+ AFLNGD+DE IYM
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217
Query: 194 -----------VCKLKKSIYGLKLAFRQWYYKFQQVVVSFGF 224
VC LKKSIYGLK A RQW+ KF ++ FGF
Sbjct: 218 ARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGF 259
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (424), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 103/162 (63%), Gaps = 18/162 (11%)
Query: 81 WINAMNEEYKSMQDNQVWDLVPLPEGKKPIGCKWIFTSKRDSKGNVERYKARLVAKGFTQ 140
W AM++E +M+ W++ LP KKPIGCKW++ K +S G +ERYKARLVAKG+TQ
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157
Query: 141 KEGVYHKETFSPVSLKDSFRIIMPLVAHFDPELHQMDVKTAFLNGDIDETIYM------- 193
+EG+ ETFSPV S ++I+ + A ++ LHQ+D+ AFLNGD+DE IYM
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217
Query: 194 -----------VCKLKKSIYGLKLAFRQWYYKFQQVVVSFGF 224
VC LKKSIYGLK A RQW+ KF ++ FGF
Sbjct: 218 ARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGF 259
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 90.5 bits (223), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 54/83 (65%)
Query: 81 WINAMNEEYKSMQDNQVWDLVPLPEGKKPIGCKWIFTSKRDSKGNVERYKARLVAKGFTQ 140
W AM EE ++ N+ W LVP P + +GCKW+F +K S G ++R KARLVAKGF Q
Sbjct: 40 WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99
Query: 141 KEGVYHKETFSPVSLKDSFRIIM 163
+EG+Y ET+SPV + R I+
Sbjct: 100 EEGIYFVETYSPVVRTATIRTIL 122